Gene : Glyma.15G151800 G. max Wm82.a2.v1
Defline:  (1 of 104) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  1518
Name:  ? Glyma.15G151800 Secondary Identifier:  ? PAC:30497144
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G151800 0.5kb upstream 0.5kb upstream 5965 true Chr15: 12574944-12580908 Glycine max
Glyma.15G151800 0.5kb upstream 0.5kb upstream 500 false Chr15: 12574944-12575443 Glycine max
Glyma.15G151800 0.5kb downstream 0.5kb downstream 5965 true Chr15: 12575444-12581408 Glycine max
Glyma.15G151800 0.5kb downstream 0.5kb downstream 500 false Chr15: 12580909-12581408 Glycine max
Glyma.15G151800 1.0kb upstream 1.0kb upstream 6465 true Chr15: 12574444-12580908 Glycine max
Glyma.15G151800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 12574444-12575443 Glycine max
Glyma.15G151800 1.0kb downstream 1.0kb downstream 6465 true Chr15: 12575444-12581908 Glycine max
Glyma.15G151800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 12580909-12581908 Glycine max
Glyma.15G151800 2.0kb upstream 2.0kb upstream 7465 true Chr15: 12573444-12580908 Glycine max
Glyma.15G151800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 12573444-12575443 Glycine max
Glyma.15G151800 2.0kb downstream 2.0kb downstream 7465 true Chr15: 12575444-12582908 Glycine max
Glyma.15G151800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 12580909-12582908 Glycine max
Glyma.15G151800 5.0kb upstream 5.0kb upstream 10465 true Chr15: 12570444-12580908 Glycine max
Glyma.15G151800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 12570444-12575443 Glycine max
Glyma.15G151800 5.0kb downstream 5.0kb downstream 10465 true Chr15: 12575444-12585908 Glycine max
Glyma.15G151800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 12580909-12585908 Glycine max
Glyma.15G151800 10.0kb upstream 10.0kb upstream 15465 true Chr15: 12565444-12580908 Glycine max
Glyma.15G151800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 12565444-12575443 Glycine max
Glyma.15G151800 10.0kb downstream 10.0kb downstream 15465 true Chr15: 12575444-12590908 Glycine max
Glyma.15G151800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 12580909-12590908 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310493 5265 Fabidae View MSA
124071236 5270 Rosid View MSA
123746324 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011442 0.0 0.0517466 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.59038 0.0 23.3882   High
cufflinks 0.0429353 0.0 0.17534 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0101401 0.0 0.0464437 Low  
cufflinks 0.0334325 0.0 0.138452 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.454        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.071       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain