Gene : Glyma.15G075400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15696:SF3 - PROTEIN SMG7L Genomic Order:  754
Name:  ? Glyma.15G075400 Secondary Identifier:  ? PAC:30495659
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G075400 0.5kb upstream 0.5kb upstream 8901 true Chr15: 5783004-5791904 Glycine max
Glyma.15G075400 0.5kb upstream 0.5kb upstream 500 false Chr15: 5783004-5783503 Glycine max
Glyma.15G075400 0.5kb downstream 0.5kb downstream 8901 true Chr15: 5783504-5792404 Glycine max
Glyma.15G075400 0.5kb downstream 0.5kb downstream 500 false Chr15: 5791905-5792404 Glycine max
Glyma.15G075400 1.0kb upstream 1.0kb upstream 9401 true Chr15: 5782504-5791904 Glycine max
Glyma.15G075400 1.0kb upstream 1.0kb upstream 1000 false Chr15: 5782504-5783503 Glycine max
Glyma.15G075400 1.0kb downstream 1.0kb downstream 9401 true Chr15: 5783504-5792904 Glycine max
Glyma.15G075400 1.0kb downstream 1.0kb downstream 1000 false Chr15: 5791905-5792904 Glycine max
Glyma.15G075400 2.0kb upstream 2.0kb upstream 10401 true Chr15: 5781504-5791904 Glycine max
Glyma.15G075400 2.0kb upstream 2.0kb upstream 2000 false Chr15: 5781504-5783503 Glycine max
Glyma.15G075400 2.0kb downstream 2.0kb downstream 10401 true Chr15: 5783504-5793904 Glycine max
Glyma.15G075400 2.0kb downstream 2.0kb downstream 2000 false Chr15: 5791905-5793904 Glycine max
Glyma.15G075400 5.0kb upstream 5.0kb upstream 13401 true Chr15: 5778504-5791904 Glycine max
Glyma.15G075400 5.0kb upstream 5.0kb upstream 5000 false Chr15: 5778504-5783503 Glycine max
Glyma.15G075400 5.0kb downstream 5.0kb downstream 13401 true Chr15: 5783504-5796904 Glycine max
Glyma.15G075400 5.0kb downstream 5.0kb downstream 5000 false Chr15: 5791905-5796904 Glycine max
Glyma.15G075400 10.0kb upstream 10.0kb upstream 18401 true Chr15: 5773504-5791904 Glycine max
Glyma.15G075400 10.0kb upstream 10.0kb upstream 10000 false Chr15: 5773504-5783503 Glycine max
Glyma.15G075400 10.0kb downstream 10.0kb downstream 18401 true Chr15: 5783504-5801904 Glycine max
Glyma.15G075400 10.0kb downstream 10.0kb downstream 10000 false Chr15: 5791905-5801904 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300747 5265 Fabidae View MSA
124050275 5270 Rosid View MSA
123740560 5271 Pentapetalae View MSA
122792675 5272 Eudicot View MSA
122043425 5273 Angiosperm View MSA
121310120 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.95799 0.0 17.65    
cufflinks 2.26485 0.0 8.16752   Low
cufflinks 18.3654 0.0 68.6994   High
cufflinks 8.25754 0.0 28.3763    
cufflinks 2.83395 0.0 11.2375   Low
cufflinks 5.18391 0.0 20.4478    
cufflinks 4.3879 0.0 13.9346    
cufflinks 6.58956 0.0 25.3173    
cufflinks 4.72289 0.0 18.8044    
cufflinks 0.542        
cufflinks 1.936       High
cufflinks 3.743       High
cufflinks 0.539        
cufflinks 0.207       Low
cufflinks 1.127        
cufflinks 0.563        
cufflinks 0.246       Low
cufflinks 1.404        
cufflinks 0.59        
cufflinks 0.695        
cufflinks 1.979       High
cufflinks 0.561        
cufflinks 0.358        
cufflinks 1.735       High
cufflinks 0.596        
cufflinks 0.692        

0 Strain