Gene : Glyma.15G017500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31734:SF5 - AUXIN-RESPONSIVE PROTEIN IAA27 Genomic Order:  175
Name:  ? Glyma.15G017500 Secondary Identifier:  ? PAC:30496775
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G017500 0.5kb upstream 0.5kb upstream 3429 true Chr15: 1366522-1369950 Glycine max
Glyma.15G017500 0.5kb upstream 0.5kb upstream 500 false Chr15: 1366522-1367021 Glycine max
Glyma.15G017500 0.5kb downstream 0.5kb downstream 3429 true Chr15: 1367022-1370450 Glycine max
Glyma.15G017500 0.5kb downstream 0.5kb downstream 500 false Chr15: 1369951-1370450 Glycine max
Glyma.15G017500 1.0kb upstream 1.0kb upstream 3929 true Chr15: 1366022-1369950 Glycine max
Glyma.15G017500 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1366022-1367021 Glycine max
Glyma.15G017500 1.0kb downstream 1.0kb downstream 3929 true Chr15: 1367022-1370950 Glycine max
Glyma.15G017500 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1369951-1370950 Glycine max
Glyma.15G017500 2.0kb upstream 2.0kb upstream 4929 true Chr15: 1365022-1369950 Glycine max
Glyma.15G017500 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1365022-1367021 Glycine max
Glyma.15G017500 2.0kb downstream 2.0kb downstream 4929 true Chr15: 1367022-1371950 Glycine max
Glyma.15G017500 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1369951-1371950 Glycine max
Glyma.15G017500 5.0kb upstream 5.0kb upstream 7929 true Chr15: 1362022-1369950 Glycine max
Glyma.15G017500 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1362022-1367021 Glycine max
Glyma.15G017500 5.0kb downstream 5.0kb downstream 7929 true Chr15: 1367022-1374950 Glycine max
Glyma.15G017500 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1369951-1374950 Glycine max
Glyma.15G017500 10.0kb upstream 10.0kb upstream 12929 true Chr15: 1357022-1369950 Glycine max
Glyma.15G017500 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1357022-1367021 Glycine max
Glyma.15G017500 10.0kb downstream 10.0kb downstream 12929 true Chr15: 1367022-1379950 Glycine max
Glyma.15G017500 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1369951-1379950 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303110 5265 Fabidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.576 0.0 185.384 High  
cufflinks 12.5346 0.0 46.2492    
cufflinks 21.3645 0.0 103.024 High  
cufflinks 55.5763 0.0 229.655 High  
cufflinks 21.3118 0.0 77.5172 High  
cufflinks 18.7618 0.0 67.4518    
cufflinks 3.86786 0.0 11.8213   Low
cufflinks 97.9638 0.0 565.323 High High
cufflinks 16.5078 0.0 67.1208    
cufflinks 18.332     High High
cufflinks 1.261       Low
cufflinks 1.908        
cufflinks 5.601        
cufflinks 3.064        
cufflinks 0.521       Low
cufflinks 8.079     High High
cufflinks 3.427        
cufflinks 1.498        
cufflinks 2.074        
cufflinks 6.735        
cufflinks 2.333        
cufflinks 7.061        
cufflinks 4.092        
cufflinks 1.351        
cufflinks 7.646     High  
cufflinks 2.416        

0 Strain