Gene : Glyma.15G013800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 Genomic Order:  138
Name:  ? Glyma.15G013800 Secondary Identifier:  ? PAC:30495881
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.15G013800 0.5kb upstream 0.5kb upstream 10925 true Chr15: 1105392-1116316 Glycine max
Glyma.15G013800 0.5kb upstream 0.5kb upstream 500 false Chr15: 1115817-1116316 Glycine max
Glyma.15G013800 0.5kb downstream 0.5kb downstream 10925 true Chr15: 1104892-1115816 Glycine max
Glyma.15G013800 0.5kb downstream 0.5kb downstream 500 false Chr15: 1104892-1105391 Glycine max
Glyma.15G013800 1.0kb upstream 1.0kb upstream 11425 true Chr15: 1105392-1116816 Glycine max
Glyma.15G013800 1.0kb upstream 1.0kb upstream 1000 false Chr15: 1115817-1116816 Glycine max
Glyma.15G013800 1.0kb downstream 1.0kb downstream 11425 true Chr15: 1104392-1115816 Glycine max
Glyma.15G013800 1.0kb downstream 1.0kb downstream 1000 false Chr15: 1104392-1105391 Glycine max
Glyma.15G013800 2.0kb upstream 2.0kb upstream 12425 true Chr15: 1105392-1117816 Glycine max
Glyma.15G013800 2.0kb upstream 2.0kb upstream 2000 false Chr15: 1115817-1117816 Glycine max
Glyma.15G013800 2.0kb downstream 2.0kb downstream 12425 true Chr15: 1103392-1115816 Glycine max
Glyma.15G013800 2.0kb downstream 2.0kb downstream 2000 false Chr15: 1103392-1105391 Glycine max
Glyma.15G013800 5.0kb upstream 5.0kb upstream 15425 true Chr15: 1105392-1120816 Glycine max
Glyma.15G013800 5.0kb upstream 5.0kb upstream 5000 false Chr15: 1115817-1120816 Glycine max
Glyma.15G013800 5.0kb downstream 5.0kb downstream 15425 true Chr15: 1100392-1115816 Glycine max
Glyma.15G013800 5.0kb downstream 5.0kb downstream 5000 false Chr15: 1100392-1105391 Glycine max
Glyma.15G013800 10.0kb upstream 10.0kb upstream 20425 true Chr15: 1105392-1125816 Glycine max
Glyma.15G013800 10.0kb upstream 10.0kb upstream 10000 false Chr15: 1115817-1125816 Glycine max
Glyma.15G013800 10.0kb downstream 10.0kb downstream 20425 true Chr15: 1095392-1115816 Glycine max
Glyma.15G013800 10.0kb downstream 10.0kb downstream 10000 false Chr15: 1095392-1105391 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314156 5265 Fabidae View MSA
124066819 5270 Rosid View MSA
123745194 5271 Pentapetalae View MSA
122792729 5272 Eudicot View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6476 0.0 48.4224    
cufflinks 16.7571 0.0 61.3702    
cufflinks 10.1657 0.0 35.431   Low
cufflinks 20.0231 0.0 74.1303 High  
cufflinks 29.7843 0.0 123.198 High High
cufflinks 16.4423 0.0 59.0992    
cufflinks 22.2388 0.0 85.2291 High  
cufflinks 25.0103 0.0 98.4113 High  
cufflinks 16.7282 0.0 60.6673    
cufflinks 5.047       High
cufflinks 1.384       Low
cufflinks 1.885        
cufflinks 4.984       High
cufflinks 6.59       High
cufflinks 1.799       Low
cufflinks 3.34        
cufflinks 1.721       Low
cufflinks 3.497        
cufflinks 3.735        
cufflinks 3.034        
cufflinks 2.451        
cufflinks 3.12        
cufflinks 3.014        
cufflinks 1.721       Low
cufflinks 3.188        
cufflinks 2.007        

0 Strain