Gene : Glyma.14G202200 G. max Wm82.a2.v1
Defline:  (1 of 788) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2022
Name:  ? Glyma.14G202200 Secondary Identifier:  ? PAC:30533192
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G202200 0.5kb upstream 0.5kb upstream 2462 true Chr14: 46748903-46751364 Glycine max
Glyma.14G202200 0.5kb upstream 0.5kb upstream 500 false Chr14: 46748903-46749402 Glycine max
Glyma.14G202200 0.5kb downstream 0.5kb downstream 2462 true Chr14: 46749403-46751864 Glycine max
Glyma.14G202200 0.5kb downstream 0.5kb downstream 500 false Chr14: 46751365-46751864 Glycine max
Glyma.14G202200 1.0kb upstream 1.0kb upstream 2962 true Chr14: 46748403-46751364 Glycine max
Glyma.14G202200 1.0kb upstream 1.0kb upstream 1000 false Chr14: 46748403-46749402 Glycine max
Glyma.14G202200 1.0kb downstream 1.0kb downstream 2962 true Chr14: 46749403-46752364 Glycine max
Glyma.14G202200 1.0kb downstream 1.0kb downstream 1000 false Chr14: 46751365-46752364 Glycine max
Glyma.14G202200 2.0kb upstream 2.0kb upstream 3962 true Chr14: 46747403-46751364 Glycine max
Glyma.14G202200 2.0kb upstream 2.0kb upstream 2000 false Chr14: 46747403-46749402 Glycine max
Glyma.14G202200 2.0kb downstream 2.0kb downstream 3962 true Chr14: 46749403-46753364 Glycine max
Glyma.14G202200 2.0kb downstream 2.0kb downstream 2000 false Chr14: 46751365-46753364 Glycine max
Glyma.14G202200 5.0kb upstream 5.0kb upstream 6962 true Chr14: 46744403-46751364 Glycine max
Glyma.14G202200 5.0kb upstream 5.0kb upstream 5000 false Chr14: 46744403-46749402 Glycine max
Glyma.14G202200 5.0kb downstream 5.0kb downstream 6962 true Chr14: 46749403-46756364 Glycine max
Glyma.14G202200 5.0kb downstream 5.0kb downstream 5000 false Chr14: 46751365-46756364 Glycine max
Glyma.14G202200 10.0kb upstream 10.0kb upstream 11962 true Chr14: 46739403-46751364 Glycine max
Glyma.14G202200 10.0kb upstream 10.0kb upstream 10000 false Chr14: 46739403-46749402 Glycine max
Glyma.14G202200 10.0kb downstream 10.0kb downstream 11962 true Chr14: 46749403-46761364 Glycine max
Glyma.14G202200 10.0kb downstream 10.0kb downstream 10000 false Chr14: 46751365-46761364 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313793 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.31059 0.0 1.1767   Low
cufflinks 0.916166 0.0 3.267   High
cufflinks 0.31339 0.0 1.18318   Low
cufflinks 0.785946 0.0 2.8323    
cufflinks 0.523389 0.0 1.93629    
cufflinks 0.523382 0.0 1.93351    
cufflinks 0.971405 0.0 3.45859   High
cufflinks 0.552696 0.0 2.03498    
cufflinks 0.823792 0.0 2.96136    
cufflinks 0.471        
cufflinks 0.039     Low Low
cufflinks 0.875        
cufflinks 0.675        
cufflinks 0.897        
cufflinks 0.232        
cufflinks 0.532        
cufflinks 0.061     Low Low
cufflinks 1.335       High
cufflinks 0.76        
cufflinks 0.543        
cufflinks 0.068       Low
cufflinks 0.531        
cufflinks 0.571        
cufflinks 0.114        
cufflinks 0.591        
cufflinks 0.099       Low

0 Strain