Gene : Glyma.14G214000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12135 - DNA REPAIR PROTEIN XP-C / RAD4 Genomic Order:  2140
Name:  ? Glyma.14G214000 Secondary Identifier:  ? PAC:30533943
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G214000 0.5kb upstream 0.5kb upstream 8701 true Chr14: 47887699-47896399 Glycine max
Glyma.14G214000 0.5kb upstream 0.5kb upstream 500 false Chr14: 47895900-47896399 Glycine max
Glyma.14G214000 0.5kb downstream 0.5kb downstream 8701 true Chr14: 47887199-47895899 Glycine max
Glyma.14G214000 0.5kb downstream 0.5kb downstream 500 false Chr14: 47887199-47887698 Glycine max
Glyma.14G214000 1.0kb upstream 1.0kb upstream 9201 true Chr14: 47887699-47896899 Glycine max
Glyma.14G214000 1.0kb upstream 1.0kb upstream 1000 false Chr14: 47895900-47896899 Glycine max
Glyma.14G214000 1.0kb downstream 1.0kb downstream 9201 true Chr14: 47886699-47895899 Glycine max
Glyma.14G214000 1.0kb downstream 1.0kb downstream 1000 false Chr14: 47886699-47887698 Glycine max
Glyma.14G214000 2.0kb upstream 2.0kb upstream 10201 true Chr14: 47887699-47897899 Glycine max
Glyma.14G214000 2.0kb upstream 2.0kb upstream 2000 false Chr14: 47895900-47897899 Glycine max
Glyma.14G214000 2.0kb downstream 2.0kb downstream 10201 true Chr14: 47885699-47895899 Glycine max
Glyma.14G214000 2.0kb downstream 2.0kb downstream 2000 false Chr14: 47885699-47887698 Glycine max
Glyma.14G214000 5.0kb upstream 5.0kb upstream 13201 true Chr14: 47887699-47900899 Glycine max
Glyma.14G214000 5.0kb upstream 5.0kb upstream 5000 false Chr14: 47895900-47900899 Glycine max
Glyma.14G214000 5.0kb downstream 5.0kb downstream 13201 true Chr14: 47882699-47895899 Glycine max
Glyma.14G214000 5.0kb downstream 5.0kb downstream 5000 false Chr14: 47882699-47887698 Glycine max
Glyma.14G214000 10.0kb upstream 10.0kb upstream 18201 true Chr14: 47887699-47905899 Glycine max
Glyma.14G214000 10.0kb upstream 10.0kb upstream 10000 false Chr14: 47895900-47905899 Glycine max
Glyma.14G214000 10.0kb downstream 10.0kb downstream 18201 true Chr14: 47877699-47895899 Glycine max
Glyma.14G214000 10.0kb downstream 10.0kb downstream 10000 false Chr14: 47877699-47887698 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303800 5265 Fabidae View MSA
124051067 5270 Rosid View MSA
123738290 5271 Pentapetalae View MSA
122788160 5272 Eudicot View MSA
122049699 5273 Angiosperm View MSA
121347837 5274 Embryophyte View MSA
123425699 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.27979 0.0 8.40694    
cufflinks 4.63904 0.0 14.5075   High
cufflinks 2.58321 0.0 9.0899    
cufflinks 2.88232 0.0 10.3298    
cufflinks 1.79348 0.0 7.13162    
cufflinks 1.51212 0.0 4.86681   Low
cufflinks 4.07224 0.0 13.0741   High
cufflinks 1.81645 0.0 7.12691    
cufflinks 2.12521 0.0 7.97397    
cufflinks 0.414        
cufflinks 0.293        
cufflinks 0.646        
cufflinks 0.429        
cufflinks 0.614        
cufflinks 0.461        
cufflinks 0.979        
cufflinks 0.131       Low
cufflinks 0.709        
cufflinks 1.015       High
cufflinks 0.953        
cufflinks 0.267       Low
cufflinks 0.997       High
cufflinks 0.919        
cufflinks 0.336        
cufflinks 1.117       High
cufflinks 0.275       Low

0 Strain