Gene : Glyma.14G049600 G. max Wm82.a2.v1
Defline:  (1 of 5) KOG1572 - Predicted protein tyrosine phosphatase Genomic Order:  496
Name:  ? Glyma.14G049600 Secondary Identifier:  ? PAC:30531899
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G049600 0.5kb upstream 0.5kb upstream 7151 true Chr14: 3845462-3852612 Glycine max
Glyma.14G049600 0.5kb upstream 0.5kb upstream 500 false Chr14: 3852113-3852612 Glycine max
Glyma.14G049600 0.5kb downstream 0.5kb downstream 7151 true Chr14: 3844962-3852112 Glycine max
Glyma.14G049600 0.5kb downstream 0.5kb downstream 500 false Chr14: 3844962-3845461 Glycine max
Glyma.14G049600 1.0kb upstream 1.0kb upstream 7651 true Chr14: 3845462-3853112 Glycine max
Glyma.14G049600 1.0kb upstream 1.0kb upstream 1000 false Chr14: 3852113-3853112 Glycine max
Glyma.14G049600 1.0kb downstream 1.0kb downstream 7651 true Chr14: 3844462-3852112 Glycine max
Glyma.14G049600 1.0kb downstream 1.0kb downstream 1000 false Chr14: 3844462-3845461 Glycine max
Glyma.14G049600 2.0kb upstream 2.0kb upstream 8651 true Chr14: 3845462-3854112 Glycine max
Glyma.14G049600 2.0kb upstream 2.0kb upstream 2000 false Chr14: 3852113-3854112 Glycine max
Glyma.14G049600 2.0kb downstream 2.0kb downstream 8651 true Chr14: 3843462-3852112 Glycine max
Glyma.14G049600 2.0kb downstream 2.0kb downstream 2000 false Chr14: 3843462-3845461 Glycine max
Glyma.14G049600 5.0kb upstream 5.0kb upstream 11651 true Chr14: 3845462-3857112 Glycine max
Glyma.14G049600 5.0kb upstream 5.0kb upstream 5000 false Chr14: 3852113-3857112 Glycine max
Glyma.14G049600 5.0kb downstream 5.0kb downstream 11651 true Chr14: 3840462-3852112 Glycine max
Glyma.14G049600 5.0kb downstream 5.0kb downstream 5000 false Chr14: 3840462-3845461 Glycine max
Glyma.14G049600 10.0kb upstream 10.0kb upstream 16651 true Chr14: 3845462-3862112 Glycine max
Glyma.14G049600 10.0kb upstream 10.0kb upstream 10000 false Chr14: 3852113-3862112 Glycine max
Glyma.14G049600 10.0kb downstream 10.0kb downstream 16651 true Chr14: 3835462-3852112 Glycine max
Glyma.14G049600 10.0kb downstream 10.0kb downstream 10000 false Chr14: 3835462-3845461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308728 5265 Fabidae View MSA
124073099 5270 Rosid View MSA
123742973 5271 Pentapetalae View MSA
122795531 5272 Eudicot View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.00858 0.0 41.4741    
cufflinks 1.73684 0.0 13.7698   Low
cufflinks 43.0071 0.0 214.338 High High
cufflinks 10.8322 0.0 55.2465    
cufflinks 7.07172 0.0 38.8311    
cufflinks 14.6117 0.0 71.7065    
cufflinks 4.07335 0.0 21.0528    
cufflinks 3.5936 0.0 18.7024    
cufflinks 4.17564 0.0 29.9028    
cufflinks 0.085     Low  
cufflinks 0.984       High
cufflinks 0.766        
cufflinks 0.284        
cufflinks 0.28        
cufflinks 0.298        
cufflinks 0.088     Low  
cufflinks 0.326        
cufflinks 0.138        
cufflinks 0.094     Low  
cufflinks 0.062     Low Low
cufflinks 1.352       High
cufflinks 0.078     Low  
cufflinks 0.073     Low Low
cufflinks 1.139       High
cufflinks 0.058     Low Low
cufflinks 1.698       High

0 Strain