Gene : Glyma.14G054800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22950//PTHR22950:SF289 - AMINO ACID TRANSPORTER Genomic Order:  548
Name:  ? Glyma.14G054800 Secondary Identifier:  ? PAC:30533076
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G054800 0.5kb upstream 0.5kb upstream 5255 true Chr14: 4371660-4376914 Glycine max
Glyma.14G054800 0.5kb upstream 0.5kb upstream 500 false Chr14: 4376415-4376914 Glycine max
Glyma.14G054800 0.5kb downstream 0.5kb downstream 5255 true Chr14: 4371160-4376414 Glycine max
Glyma.14G054800 0.5kb downstream 0.5kb downstream 500 false Chr14: 4371160-4371659 Glycine max
Glyma.14G054800 1.0kb upstream 1.0kb upstream 5755 true Chr14: 4371660-4377414 Glycine max
Glyma.14G054800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 4376415-4377414 Glycine max
Glyma.14G054800 1.0kb downstream 1.0kb downstream 5755 true Chr14: 4370660-4376414 Glycine max
Glyma.14G054800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 4370660-4371659 Glycine max
Glyma.14G054800 2.0kb upstream 2.0kb upstream 6755 true Chr14: 4371660-4378414 Glycine max
Glyma.14G054800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 4376415-4378414 Glycine max
Glyma.14G054800 2.0kb downstream 2.0kb downstream 6755 true Chr14: 4369660-4376414 Glycine max
Glyma.14G054800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 4369660-4371659 Glycine max
Glyma.14G054800 5.0kb upstream 5.0kb upstream 9755 true Chr14: 4371660-4381414 Glycine max
Glyma.14G054800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 4376415-4381414 Glycine max
Glyma.14G054800 5.0kb downstream 5.0kb downstream 9755 true Chr14: 4366660-4376414 Glycine max
Glyma.14G054800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 4366660-4371659 Glycine max
Glyma.14G054800 10.0kb upstream 10.0kb upstream 14755 true Chr14: 4371660-4386414 Glycine max
Glyma.14G054800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 4376415-4386414 Glycine max
Glyma.14G054800 10.0kb downstream 10.0kb downstream 14755 true Chr14: 4361660-4376414 Glycine max
Glyma.14G054800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 4361660-4371659 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304317 5265 Fabidae View MSA
124037615 5270 Rosid View MSA
123746056 5271 Pentapetalae View MSA
122795353 5272 Eudicot View MSA
122048665 5273 Angiosperm View MSA
121311064 5274 Embryophyte View MSA
123428317 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4505 0.0 46.5822    
cufflinks 8.38665 0.0 23.1448    
cufflinks 37.0377 0.0 101.187 High High
cufflinks 5.95972 0.0 17.0296   Low
cufflinks 22.5207 0.0 60.1557 High  
cufflinks 15.6488 0.0 41.8343    
cufflinks 6.98641 0.0 19.6567    
cufflinks 7.53866 0.0 21.005    
cufflinks 13.8979 0.0 37.2577    
cufflinks 2.92        
cufflinks 14.66     High High
cufflinks 7.63     High  
cufflinks 8.178     High  
cufflinks 12.793     High High
cufflinks 13.566     High High
cufflinks 4.321        
cufflinks 0.844       Low
cufflinks 4.777        
cufflinks 2.211        
cufflinks 8.219     High  
cufflinks 7.836     High  
cufflinks 2.661        
cufflinks 1.344       Low
cufflinks 5.555        
cufflinks 6.984     High  
cufflinks 3.804        

0 Strain