Gene : Glyma.13G372400 G. max Wm82.a2.v1
Defline:  (1 of 8) PF00122//PF00689//PF00690//PF00702//PF12515 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // haloacid dehalogenase-like hydrolase (Hydrolase) // Ca2+-ATPase N terminal autoinhibitory domain (CaATP_NAI) Genomic Order:  3724
Name:  ? Glyma.13G372400 Secondary Identifier:  ? PAC:30503201
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G372400 0.5kb upstream 0.5kb upstream 17799 true Chr13: 45741241-45759039 Glycine max
Glyma.13G372400 0.5kb upstream 0.5kb upstream 500 false Chr13: 45758540-45759039 Glycine max
Glyma.13G372400 0.5kb downstream 0.5kb downstream 17799 true Chr13: 45740741-45758539 Glycine max
Glyma.13G372400 0.5kb downstream 0.5kb downstream 500 false Chr13: 45740741-45741240 Glycine max
Glyma.13G372400 1.0kb upstream 1.0kb upstream 18299 true Chr13: 45741241-45759539 Glycine max
Glyma.13G372400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 45758540-45759539 Glycine max
Glyma.13G372400 1.0kb downstream 1.0kb downstream 18299 true Chr13: 45740241-45758539 Glycine max
Glyma.13G372400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 45740241-45741240 Glycine max
Glyma.13G372400 2.0kb upstream 2.0kb upstream 19299 true Chr13: 45741241-45760539 Glycine max
Glyma.13G372400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 45758540-45760539 Glycine max
Glyma.13G372400 2.0kb downstream 2.0kb downstream 19299 true Chr13: 45739241-45758539 Glycine max
Glyma.13G372400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 45739241-45741240 Glycine max
Glyma.13G372400 5.0kb upstream 5.0kb upstream 22299 true Chr13: 45741241-45763539 Glycine max
Glyma.13G372400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 45758540-45763539 Glycine max
Glyma.13G372400 5.0kb downstream 5.0kb downstream 22299 true Chr13: 45736241-45758539 Glycine max
Glyma.13G372400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 45736241-45741240 Glycine max
Glyma.13G372400 10.0kb upstream 10.0kb upstream 27299 true Chr13: 45741241-45768539 Glycine max
Glyma.13G372400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 45758540-45768539 Glycine max
Glyma.13G372400 10.0kb downstream 10.0kb downstream 27299 true Chr13: 45731241-45758539 Glycine max
Glyma.13G372400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 45731241-45741240 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310245 5265 Fabidae View MSA
124063476 5270 Rosid View MSA
123739900 5271 Pentapetalae View MSA
122792440 5272 Eudicot View MSA
122044045 5273 Angiosperm View MSA
121346260 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.438368 0.0 1.90632    
cufflinks 0.528976 0.0 2.24549    
cufflinks 0.618402 0.0 2.46099    
cufflinks 0.37927 0.0 1.64793    
cufflinks 0.177172 0.0 0.875643 Low Low
cufflinks 0.179722 0.0 0.885255 Low Low
cufflinks 0.710804 0.0 3.60825   High
cufflinks 0.316286 0.0 1.42974    
cufflinks 0.739703 0.0 2.76271   High
cufflinks 0.053     Low  
cufflinks 0.008     Low Low
cufflinks 0.113     Low  
cufflinks 0.05     Low  
cufflinks 0.04     Low  
cufflinks 0.085        
cufflinks 0.121        
cufflinks 0.019     Low  
cufflinks 0.24       High
cufflinks 0.121        
cufflinks 0.079     Low  
cufflinks 0.007     Low Low
cufflinks 0.086     Low  
cufflinks 0.169       High
cufflinks 0.006     Low Low
cufflinks 0.081     Low  
cufflinks 0.016     Low  

0 Strain