Gene : Glyma.13G348900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR37733:SF1 - SMAD/FHA DOMAIN-CONTAINING PROTEIN Genomic Order:  3489
Name:  ? Glyma.13G348900 Secondary Identifier:  ? PAC:30502762
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G348900 0.5kb upstream 0.5kb upstream 3251 true Chr13: 43886173-43889423 Glycine max
Glyma.13G348900 0.5kb upstream 0.5kb upstream 500 false Chr13: 43888924-43889423 Glycine max
Glyma.13G348900 0.5kb downstream 0.5kb downstream 3251 true Chr13: 43885673-43888923 Glycine max
Glyma.13G348900 0.5kb downstream 0.5kb downstream 500 false Chr13: 43885673-43886172 Glycine max
Glyma.13G348900 1.0kb upstream 1.0kb upstream 3751 true Chr13: 43886173-43889923 Glycine max
Glyma.13G348900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 43888924-43889923 Glycine max
Glyma.13G348900 1.0kb downstream 1.0kb downstream 3751 true Chr13: 43885173-43888923 Glycine max
Glyma.13G348900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 43885173-43886172 Glycine max
Glyma.13G348900 2.0kb upstream 2.0kb upstream 4751 true Chr13: 43886173-43890923 Glycine max
Glyma.13G348900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 43888924-43890923 Glycine max
Glyma.13G348900 2.0kb downstream 2.0kb downstream 4751 true Chr13: 43884173-43888923 Glycine max
Glyma.13G348900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 43884173-43886172 Glycine max
Glyma.13G348900 5.0kb upstream 5.0kb upstream 7751 true Chr13: 43886173-43893923 Glycine max
Glyma.13G348900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 43888924-43893923 Glycine max
Glyma.13G348900 5.0kb downstream 5.0kb downstream 7751 true Chr13: 43881173-43888923 Glycine max
Glyma.13G348900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 43881173-43886172 Glycine max
Glyma.13G348900 10.0kb upstream 10.0kb upstream 12751 true Chr13: 43886173-43898923 Glycine max
Glyma.13G348900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 43888924-43898923 Glycine max
Glyma.13G348900 10.0kb downstream 10.0kb downstream 12751 true Chr13: 43876173-43888923 Glycine max
Glyma.13G348900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 43876173-43886172 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027320 5273 Angiosperm View MSA
122240672 5265 Fabidae Singleton cluster - no MSA
123985682 5270 Rosid Singleton cluster - no MSA
123561084 5271 Pentapetalae Singleton cluster - no MSA
122595876 5272 Eudicot Singleton cluster - no MSA
121296988 5274 Embryophyte View MSA
123335089 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.89476 0.0 11.4058    
cufflinks 3.01908 0.0 20.1915   High
cufflinks 1.5937 0.0 8.3042    
cufflinks 1.17117 0.0 10.5125    
cufflinks 0.958415 0.0 5.59417    
cufflinks 0.800088 0.0 4.82921   Low
cufflinks 1.27732 0.0 9.44481    
cufflinks 1.08403 0.0 8.83269    
cufflinks 1.16702 0.0 8.08494    
cufflinks 0.155        
cufflinks 0.099        
cufflinks 0.593        
cufflinks 0.172        
cufflinks 0.204        
cufflinks 0.131        
cufflinks 0.544        
cufflinks 0.047     Low Low
cufflinks 0.779       High
cufflinks 0.845       High
cufflinks 0.599        
cufflinks 0.056     Low Low
cufflinks 0.653        
cufflinks 0.606        
cufflinks 0.11        
cufflinks 0.658        
cufflinks 0.035     Low Low

0 Strain