Gene : Glyma.13G354900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23406//PTHR23406:SF11 - MALIC ENZYME-RELATED Genomic Order:  3549
Name:  ? Glyma.13G354900 Secondary Identifier:  ? PAC:30505378
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G354900 0.5kb upstream 0.5kb upstream 6146 true Chr13: 44343888-44350033 Glycine max
Glyma.13G354900 0.5kb upstream 0.5kb upstream 500 false Chr13: 44349534-44350033 Glycine max
Glyma.13G354900 0.5kb downstream 0.5kb downstream 6146 true Chr13: 44343388-44349533 Glycine max
Glyma.13G354900 0.5kb downstream 0.5kb downstream 500 false Chr13: 44343388-44343887 Glycine max
Glyma.13G354900 1.0kb upstream 1.0kb upstream 6646 true Chr13: 44343888-44350533 Glycine max
Glyma.13G354900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 44349534-44350533 Glycine max
Glyma.13G354900 1.0kb downstream 1.0kb downstream 6646 true Chr13: 44342888-44349533 Glycine max
Glyma.13G354900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 44342888-44343887 Glycine max
Glyma.13G354900 2.0kb upstream 2.0kb upstream 7646 true Chr13: 44343888-44351533 Glycine max
Glyma.13G354900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 44349534-44351533 Glycine max
Glyma.13G354900 2.0kb downstream 2.0kb downstream 7646 true Chr13: 44341888-44349533 Glycine max
Glyma.13G354900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 44341888-44343887 Glycine max
Glyma.13G354900 5.0kb upstream 5.0kb upstream 10646 true Chr13: 44343888-44354533 Glycine max
Glyma.13G354900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 44349534-44354533 Glycine max
Glyma.13G354900 5.0kb downstream 5.0kb downstream 10646 true Chr13: 44338888-44349533 Glycine max
Glyma.13G354900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 44338888-44343887 Glycine max
Glyma.13G354900 10.0kb upstream 10.0kb upstream 15646 true Chr13: 44343888-44359533 Glycine max
Glyma.13G354900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 44349534-44359533 Glycine max
Glyma.13G354900 10.0kb downstream 10.0kb downstream 15646 true Chr13: 44333888-44349533 Glycine max
Glyma.13G354900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 44333888-44343887 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301103 5265 Fabidae View MSA
124068705 5270 Rosid View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.4614 0.0 221.169 High  
cufflinks 34.8542 0.0 135.424 High  
cufflinks 27.1812 0.0 99.9677 High Low
cufflinks 58.2879 0.0 226.217 High  
cufflinks 55.1981 0.0 210.189 High  
cufflinks 53.3191 0.0 200.631 High  
cufflinks 102.037 0.0 501.392 High High
cufflinks 33.6298 0.0 129.218 High  
cufflinks 38.777 0.0 154.395 High  
cufflinks 12.099     High Low
cufflinks 40.464     High High
cufflinks 10.583     High Low
cufflinks 25.069     High  
cufflinks 21.457     High  
cufflinks 87.833     High High
cufflinks 21.979     High  
cufflinks 19.515     High  
cufflinks 20.534     High  
cufflinks 11.445     High Low
cufflinks 13.198     High  
cufflinks 39.916     High High
cufflinks 17.029     High  
cufflinks 14.375     High  
cufflinks 30.682     High  
cufflinks 23.055     High  
cufflinks 23.508     High  

0 Strain