Gene : Glyma.13G296900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10037 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM Genomic Order:  2969
Name:  ? Glyma.13G296900 Secondary Identifier:  ? PAC:30502778
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G296900 0.5kb upstream 0.5kb upstream 19299 true Chr13: 39576148-39595446 Glycine max
Glyma.13G296900 0.5kb upstream 0.5kb upstream 500 false Chr13: 39594947-39595446 Glycine max
Glyma.13G296900 0.5kb downstream 0.5kb downstream 19299 true Chr13: 39575648-39594946 Glycine max
Glyma.13G296900 0.5kb downstream 0.5kb downstream 500 false Chr13: 39575648-39576147 Glycine max
Glyma.13G296900 1.0kb upstream 1.0kb upstream 19799 true Chr13: 39576148-39595946 Glycine max
Glyma.13G296900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39594947-39595946 Glycine max
Glyma.13G296900 1.0kb downstream 1.0kb downstream 19799 true Chr13: 39575148-39594946 Glycine max
Glyma.13G296900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39575148-39576147 Glycine max
Glyma.13G296900 2.0kb upstream 2.0kb upstream 20799 true Chr13: 39576148-39596946 Glycine max
Glyma.13G296900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39594947-39596946 Glycine max
Glyma.13G296900 2.0kb downstream 2.0kb downstream 20799 true Chr13: 39574148-39594946 Glycine max
Glyma.13G296900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39574148-39576147 Glycine max
Glyma.13G296900 5.0kb upstream 5.0kb upstream 23799 true Chr13: 39576148-39599946 Glycine max
Glyma.13G296900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39594947-39599946 Glycine max
Glyma.13G296900 5.0kb downstream 5.0kb downstream 23799 true Chr13: 39571148-39594946 Glycine max
Glyma.13G296900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39571148-39576147 Glycine max
Glyma.13G296900 10.0kb upstream 10.0kb upstream 28799 true Chr13: 39576148-39604946 Glycine max
Glyma.13G296900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39594947-39604946 Glycine max
Glyma.13G296900 10.0kb downstream 10.0kb downstream 28799 true Chr13: 39566148-39594946 Glycine max
Glyma.13G296900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39566148-39576147 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299491 5265 Fabidae View MSA
124050278 5270 Rosid View MSA
123736366 5271 Pentapetalae View MSA
122789852 5272 Eudicot View MSA
122042673 5273 Angiosperm View MSA
121347876 5274 Embryophyte View MSA
123380661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.4353 0.0 91.0865 High  
cufflinks 23.8882 0.0 65.3503 High  
cufflinks 40.6511 0.0 117.939 High  
cufflinks 32.69 0.0 92.0683 High  
cufflinks 23.978 0.0 65.4703 High  
cufflinks 126.606 0.0 455.372 High High
cufflinks 8.17533 0.0 22.0165   Low
cufflinks 25.2837 0.0 69.3794 High  
cufflinks 24.378 0.0 66.7567 High  
cufflinks 4.784        
cufflinks 6.833     High  
cufflinks 6.055        
cufflinks 4.33        
cufflinks 3.929        
cufflinks 2.556       Low
cufflinks 4.907        
cufflinks 10.383     High High
cufflinks 5.281        
cufflinks 4.323        
cufflinks 5.396        
cufflinks 8.35     High High
cufflinks 6.561        
cufflinks 3.808        
cufflinks 6.509     High  
cufflinks 4.251        
cufflinks 5.019        

0 Strain