Gene : Glyma.13G310900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN Genomic Order:  3109
Name:  ? Glyma.13G310900 Secondary Identifier:  ? PAC:30501299
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G310900 0.5kb upstream 0.5kb upstream 5677 true Chr13: 40627650-40633326 Glycine max
Glyma.13G310900 0.5kb upstream 0.5kb upstream 500 false Chr13: 40627650-40628149 Glycine max
Glyma.13G310900 0.5kb downstream 0.5kb downstream 5677 true Chr13: 40628150-40633826 Glycine max
Glyma.13G310900 0.5kb downstream 0.5kb downstream 500 false Chr13: 40633327-40633826 Glycine max
Glyma.13G310900 1.0kb upstream 1.0kb upstream 6177 true Chr13: 40627150-40633326 Glycine max
Glyma.13G310900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40627150-40628149 Glycine max
Glyma.13G310900 1.0kb downstream 1.0kb downstream 6177 true Chr13: 40628150-40634326 Glycine max
Glyma.13G310900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40633327-40634326 Glycine max
Glyma.13G310900 2.0kb upstream 2.0kb upstream 7177 true Chr13: 40626150-40633326 Glycine max
Glyma.13G310900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40626150-40628149 Glycine max
Glyma.13G310900 2.0kb downstream 2.0kb downstream 7177 true Chr13: 40628150-40635326 Glycine max
Glyma.13G310900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40633327-40635326 Glycine max
Glyma.13G310900 5.0kb upstream 5.0kb upstream 10177 true Chr13: 40623150-40633326 Glycine max
Glyma.13G310900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40623150-40628149 Glycine max
Glyma.13G310900 5.0kb downstream 5.0kb downstream 10177 true Chr13: 40628150-40638326 Glycine max
Glyma.13G310900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40633327-40638326 Glycine max
Glyma.13G310900 10.0kb upstream 10.0kb upstream 15177 true Chr13: 40618150-40633326 Glycine max
Glyma.13G310900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40618150-40628149 Glycine max
Glyma.13G310900 10.0kb downstream 10.0kb downstream 15177 true Chr13: 40628150-40643326 Glycine max
Glyma.13G310900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40633327-40643326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301139 5265 Fabidae View MSA
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2127 0.0 51.6408    
cufflinks 10.8275 0.0 28.9457   Low
cufflinks 29.6508 0.0 82.2263 High High
cufflinks 15.7255 0.0 42.0323    
cufflinks 19.1357 0.0 51.4255    
cufflinks 27.5682 0.0 75.749 High  
cufflinks 20.4245 0.0 55.0195    
cufflinks 23.8084 0.0 64.7791 High  
cufflinks 24.0712 0.0 65.5032 High  
cufflinks 8.8     High  
cufflinks 7.936     High  
cufflinks 11.002     High  
cufflinks 7.03        
cufflinks 4.041       Low
cufflinks 16.832     High High
cufflinks 4.624        
cufflinks 16.329     High High
cufflinks 6.056        
cufflinks 5.163        
cufflinks 4.178       Low
cufflinks 8.473     High  
cufflinks 4.438        
cufflinks 4.285       Low
cufflinks 8.713     High  
cufflinks 4.356       Low
cufflinks 10.028     High  

0 Strain