Gene : Glyma.13G306800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12197:SF75 - HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 Genomic Order:  3068
Name:  ? Glyma.13G306800 Secondary Identifier:  ? PAC:30501981
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G306800 0.5kb upstream 0.5kb upstream 5521 true Chr13: 40283878-40289398 Glycine max
Glyma.13G306800 0.5kb upstream 0.5kb upstream 500 false Chr13: 40283878-40284377 Glycine max
Glyma.13G306800 0.5kb downstream 0.5kb downstream 5521 true Chr13: 40284378-40289898 Glycine max
Glyma.13G306800 0.5kb downstream 0.5kb downstream 500 false Chr13: 40289399-40289898 Glycine max
Glyma.13G306800 1.0kb upstream 1.0kb upstream 6021 true Chr13: 40283378-40289398 Glycine max
Glyma.13G306800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 40283378-40284377 Glycine max
Glyma.13G306800 1.0kb downstream 1.0kb downstream 6021 true Chr13: 40284378-40290398 Glycine max
Glyma.13G306800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 40289399-40290398 Glycine max
Glyma.13G306800 2.0kb upstream 2.0kb upstream 7021 true Chr13: 40282378-40289398 Glycine max
Glyma.13G306800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 40282378-40284377 Glycine max
Glyma.13G306800 2.0kb downstream 2.0kb downstream 7021 true Chr13: 40284378-40291398 Glycine max
Glyma.13G306800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 40289399-40291398 Glycine max
Glyma.13G306800 5.0kb upstream 5.0kb upstream 10021 true Chr13: 40279378-40289398 Glycine max
Glyma.13G306800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 40279378-40284377 Glycine max
Glyma.13G306800 5.0kb downstream 5.0kb downstream 10021 true Chr13: 40284378-40294398 Glycine max
Glyma.13G306800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 40289399-40294398 Glycine max
Glyma.13G306800 10.0kb upstream 10.0kb upstream 15021 true Chr13: 40274378-40289398 Glycine max
Glyma.13G306800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 40274378-40284377 Glycine max
Glyma.13G306800 10.0kb downstream 10.0kb downstream 15021 true Chr13: 40284378-40299398 Glycine max
Glyma.13G306800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 40289399-40299398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608799 5273 Angiosperm Singleton cluster - no MSA
122240765 5265 Fabidae Singleton cluster - no MSA
123985758 5270 Rosid Singleton cluster - no MSA
123561153 5271 Pentapetalae Singleton cluster - no MSA
122595945 5272 Eudicot Singleton cluster - no MSA
120881063 5274 Embryophyte Singleton cluster - no MSA
122921918 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.733144 0.0 4.52794    
cufflinks 1.36923 0.0 9.13348    
cufflinks 1.25731 0.0 6.70218    
cufflinks 1.74115 0.0 10.7703   High
cufflinks 0.400037 0.0 2.69832    
cufflinks 0.0773201 0.0 0.31099 Low Low
cufflinks 1.0913 0.0 6.17055    
cufflinks 0.613673 0.0 3.73311    
cufflinks 0.250847 0.0 0.97324 Low  
cufflinks 0.085     Low  
cufflinks 0.011     Low Low
cufflinks 0.303        
cufflinks 0.065     Low  
cufflinks 0.093        
cufflinks 0.007     Low Low
cufflinks 0.224        
cufflinks 0.05     Low  
cufflinks 0.689       High
cufflinks 0.334        
cufflinks 0.302        
cufflinks 0.022     Low  
cufflinks 0.332        
cufflinks 0.25        
cufflinks 0.016     Low Low
cufflinks 0.345        
cufflinks 0.018     Low Low

0 Strain