Gene : Glyma.13G264400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  2644
Name:  ? Glyma.13G264400 Secondary Identifier:  ? PAC:30503266
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G264400 0.5kb upstream 0.5kb upstream 3806 true Chr13: 36740782-36744587 Glycine max
Glyma.13G264400 0.5kb upstream 0.5kb upstream 500 false Chr13: 36744088-36744587 Glycine max
Glyma.13G264400 0.5kb downstream 0.5kb downstream 3806 true Chr13: 36740282-36744087 Glycine max
Glyma.13G264400 0.5kb downstream 0.5kb downstream 500 false Chr13: 36740282-36740781 Glycine max
Glyma.13G264400 1.0kb upstream 1.0kb upstream 4306 true Chr13: 36740782-36745087 Glycine max
Glyma.13G264400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 36744088-36745087 Glycine max
Glyma.13G264400 1.0kb downstream 1.0kb downstream 4306 true Chr13: 36739782-36744087 Glycine max
Glyma.13G264400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 36739782-36740781 Glycine max
Glyma.13G264400 2.0kb upstream 2.0kb upstream 5306 true Chr13: 36740782-36746087 Glycine max
Glyma.13G264400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 36744088-36746087 Glycine max
Glyma.13G264400 2.0kb downstream 2.0kb downstream 5306 true Chr13: 36738782-36744087 Glycine max
Glyma.13G264400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 36738782-36740781 Glycine max
Glyma.13G264400 5.0kb upstream 5.0kb upstream 8306 true Chr13: 36740782-36749087 Glycine max
Glyma.13G264400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 36744088-36749087 Glycine max
Glyma.13G264400 5.0kb downstream 5.0kb downstream 8306 true Chr13: 36735782-36744087 Glycine max
Glyma.13G264400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 36735782-36740781 Glycine max
Glyma.13G264400 10.0kb upstream 10.0kb upstream 13306 true Chr13: 36740782-36754087 Glycine max
Glyma.13G264400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 36744088-36754087 Glycine max
Glyma.13G264400 10.0kb downstream 10.0kb downstream 13306 true Chr13: 36730782-36744087 Glycine max
Glyma.13G264400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 36730782-36740781 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311090 5265 Fabidae View MSA
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.6609 0.0 183.326 High High
cufflinks 4.42035 0.0 17.8596    
cufflinks 6.90386 0.0 24.0441    
cufflinks 5.86131 0.0 21.6523    
cufflinks 2.21467 0.0 11.2423   Low
cufflinks 4.09067 0.0 16.8995    
cufflinks 3.99451 0.0 16.8238    
cufflinks 5.11221 0.0 19.7497    
cufflinks 3.02678 0.0 13.7806    
cufflinks 1.643        
cufflinks 8.186     High High
cufflinks 1.883        
cufflinks 1.093        
cufflinks 0.796       Low
cufflinks 2.286        
cufflinks 2.686        
cufflinks 0.215       Low
cufflinks 1.111        
cufflinks 1.558        
cufflinks 2.532        
cufflinks 2.414        
cufflinks 2.309        
cufflinks 2.141        
cufflinks 6.743     High High
cufflinks 3.684        
cufflinks 2.544        

0 Strain