Gene : Glyma.13G253900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12170:SF3 - REQUIRED FOR MEIOTIC NUCLEAR DIVISION 5 HOMOLOG B (S. CEREVISIAE) Genomic Order:  2539
Name:  ? Glyma.13G253900 Secondary Identifier:  ? PAC:30501214
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G253900 0.5kb upstream 0.5kb upstream 4777 true Chr13: 35988588-35993364 Glycine max
Glyma.13G253900 0.5kb upstream 0.5kb upstream 500 false Chr13: 35988588-35989087 Glycine max
Glyma.13G253900 0.5kb downstream 0.5kb downstream 4777 true Chr13: 35989088-35993864 Glycine max
Glyma.13G253900 0.5kb downstream 0.5kb downstream 500 false Chr13: 35993365-35993864 Glycine max
Glyma.13G253900 1.0kb upstream 1.0kb upstream 5277 true Chr13: 35988088-35993364 Glycine max
Glyma.13G253900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35988088-35989087 Glycine max
Glyma.13G253900 1.0kb downstream 1.0kb downstream 5277 true Chr13: 35989088-35994364 Glycine max
Glyma.13G253900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35993365-35994364 Glycine max
Glyma.13G253900 2.0kb upstream 2.0kb upstream 6277 true Chr13: 35987088-35993364 Glycine max
Glyma.13G253900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35987088-35989087 Glycine max
Glyma.13G253900 2.0kb downstream 2.0kb downstream 6277 true Chr13: 35989088-35995364 Glycine max
Glyma.13G253900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35993365-35995364 Glycine max
Glyma.13G253900 5.0kb upstream 5.0kb upstream 9277 true Chr13: 35984088-35993364 Glycine max
Glyma.13G253900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35984088-35989087 Glycine max
Glyma.13G253900 5.0kb downstream 5.0kb downstream 9277 true Chr13: 35989088-35998364 Glycine max
Glyma.13G253900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35993365-35998364 Glycine max
Glyma.13G253900 10.0kb upstream 10.0kb upstream 14277 true Chr13: 35979088-35993364 Glycine max
Glyma.13G253900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35979088-35989087 Glycine max
Glyma.13G253900 10.0kb downstream 10.0kb downstream 14277 true Chr13: 35989088-36003364 Glycine max
Glyma.13G253900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35993365-36003364 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305280 5265 Fabidae View MSA
124064911 5270 Rosid View MSA
123746789 5271 Pentapetalae View MSA
122791049 5272 Eudicot View MSA
122047847 5273 Angiosperm View MSA
121347432 5274 Embryophyte View MSA
123424686 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.36437 0.0 25.7313    
cufflinks 5.78208 0.0 19.0908    
cufflinks 13.3074 0.0 44.7545   High
cufflinks 5.89173 0.0 19.2746    
cufflinks 4.55858 0.0 16.011   Low
cufflinks 12.5878 0.0 42.3342   High
cufflinks 4.2993 0.0 15.4633   Low
cufflinks 6.41666 0.0 24.2036    
cufflinks 7.06405 0.0 26.1517    
cufflinks 1.563        
cufflinks 2.063        
cufflinks 3.594       High
cufflinks 1.382       Low
cufflinks 0.886       Low
cufflinks 1.966        
cufflinks 1.803        
cufflinks 1.905        
cufflinks 2.367        
cufflinks 1.675        
cufflinks 2.168        
cufflinks 1.813        
cufflinks 1.991        
cufflinks 2.092        
cufflinks 1.75        
cufflinks 2.483        
cufflinks 1.659        

0 Strain