Gene : Glyma.13G234200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF5 - AUXIN RESPONSE FACTOR 3 Genomic Order:  2342
Name:  ? Glyma.13G234200 Secondary Identifier:  ? PAC:30501582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G234200 0.5kb upstream 0.5kb upstream 6867 true Chr13: 34491785-34498651 Glycine max
Glyma.13G234200 0.5kb upstream 0.5kb upstream 500 false Chr13: 34491785-34492284 Glycine max
Glyma.13G234200 0.5kb downstream 0.5kb downstream 6867 true Chr13: 34492285-34499151 Glycine max
Glyma.13G234200 0.5kb downstream 0.5kb downstream 500 false Chr13: 34498652-34499151 Glycine max
Glyma.13G234200 1.0kb upstream 1.0kb upstream 7367 true Chr13: 34491285-34498651 Glycine max
Glyma.13G234200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34491285-34492284 Glycine max
Glyma.13G234200 1.0kb downstream 1.0kb downstream 7367 true Chr13: 34492285-34499651 Glycine max
Glyma.13G234200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34498652-34499651 Glycine max
Glyma.13G234200 2.0kb upstream 2.0kb upstream 8367 true Chr13: 34490285-34498651 Glycine max
Glyma.13G234200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34490285-34492284 Glycine max
Glyma.13G234200 2.0kb downstream 2.0kb downstream 8367 true Chr13: 34492285-34500651 Glycine max
Glyma.13G234200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34498652-34500651 Glycine max
Glyma.13G234200 5.0kb upstream 5.0kb upstream 11367 true Chr13: 34487285-34498651 Glycine max
Glyma.13G234200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34487285-34492284 Glycine max
Glyma.13G234200 5.0kb downstream 5.0kb downstream 11367 true Chr13: 34492285-34503651 Glycine max
Glyma.13G234200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34498652-34503651 Glycine max
Glyma.13G234200 10.0kb upstream 10.0kb upstream 16367 true Chr13: 34482285-34498651 Glycine max
Glyma.13G234200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34482285-34492284 Glycine max
Glyma.13G234200 10.0kb downstream 10.0kb downstream 16367 true Chr13: 34492285-34508651 Glycine max
Glyma.13G234200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34498652-34508651 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309697 5265 Fabidae View MSA
124066070 5270 Rosid View MSA
123743796 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.37583 0.0 11.972    
cufflinks 21.0705 0.0 58.5643 High High
cufflinks 3.50573 0.0 9.73901    
cufflinks 6.84461 0.0 18.3187    
cufflinks 4.89031 0.0 13.2876    
cufflinks 1.80794 0.0 5.45417   Low
cufflinks 4.27572 0.0 11.7262    
cufflinks 21.1967 0.0 59.0151 High High
cufflinks 6.67064 0.0 17.8662    
cufflinks 10.526     High  
cufflinks 0.06       Low
cufflinks 3.366        
cufflinks 2.057        
cufflinks 1.869        
cufflinks 0.536        
cufflinks 6.952        
cufflinks 0.946        
cufflinks 6.031        
cufflinks 12.971     High High
cufflinks 7.885     High  
cufflinks 0.132       Low
cufflinks 8.677     High  
cufflinks 5.783        
cufflinks 0.13       Low
cufflinks 7.369     High  
cufflinks 0.313       Low

0 Strain