Gene : Glyma.13G232700 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR32295:SF9 - IQ-DOMAIN 9 PROTEIN Genomic Order:  2327
Name:  ? Glyma.13G232700 Secondary Identifier:  ? PAC:30501776
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G232700 0.5kb upstream 0.5kb upstream 4730 true Chr13: 34366717-34371446 Glycine max
Glyma.13G232700 0.5kb upstream 0.5kb upstream 500 false Chr13: 34370947-34371446 Glycine max
Glyma.13G232700 0.5kb downstream 0.5kb downstream 4730 true Chr13: 34366217-34370946 Glycine max
Glyma.13G232700 0.5kb downstream 0.5kb downstream 500 false Chr13: 34366217-34366716 Glycine max
Glyma.13G232700 1.0kb upstream 1.0kb upstream 5230 true Chr13: 34366717-34371946 Glycine max
Glyma.13G232700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34370947-34371946 Glycine max
Glyma.13G232700 1.0kb downstream 1.0kb downstream 5230 true Chr13: 34365717-34370946 Glycine max
Glyma.13G232700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34365717-34366716 Glycine max
Glyma.13G232700 2.0kb upstream 2.0kb upstream 6230 true Chr13: 34366717-34372946 Glycine max
Glyma.13G232700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34370947-34372946 Glycine max
Glyma.13G232700 2.0kb downstream 2.0kb downstream 6230 true Chr13: 34364717-34370946 Glycine max
Glyma.13G232700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34364717-34366716 Glycine max
Glyma.13G232700 5.0kb upstream 5.0kb upstream 9230 true Chr13: 34366717-34375946 Glycine max
Glyma.13G232700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34370947-34375946 Glycine max
Glyma.13G232700 5.0kb downstream 5.0kb downstream 9230 true Chr13: 34361717-34370946 Glycine max
Glyma.13G232700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34361717-34366716 Glycine max
Glyma.13G232700 10.0kb upstream 10.0kb upstream 14230 true Chr13: 34366717-34380946 Glycine max
Glyma.13G232700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34370947-34380946 Glycine max
Glyma.13G232700 10.0kb downstream 10.0kb downstream 14230 true Chr13: 34356717-34370946 Glycine max
Glyma.13G232700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34356717-34366716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306758 5265 Fabidae View MSA
124067076 5270 Rosid View MSA
123750715 5271 Pentapetalae View MSA
122787136 5272 Eudicot View MSA
122044969 5273 Angiosperm View MSA
121310374 5274 Embryophyte View MSA
123347875 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96097 0.0 12.416   Low
cufflinks 10.4702 0.0 40.7219    
cufflinks 1.55429 0.0 10.5458   Low
cufflinks 9.7106 0.0 38.084    
cufflinks 3.46649 0.0 16.0575    
cufflinks 55.7087 0.0 247.673 High High
cufflinks 5.21155 0.0 23.6792    
cufflinks 9.23492 0.0 40.4255    
cufflinks 6.02061 0.0 26.1966    
cufflinks 0.903        
cufflinks 1.03        
cufflinks 0.267       Low
cufflinks 1.763       High
cufflinks 0.545        
cufflinks 0.265       Low
cufflinks 1.037        
cufflinks 0.45        
cufflinks 0.295       Low
cufflinks 1.342       High
cufflinks 0.861        
cufflinks 0.746        
cufflinks 0.773        
cufflinks 0.607        
cufflinks 0.799        
cufflinks 0.969        
cufflinks 1.098        

0 Strain