Gene : Glyma.13G160400 G. max Wm82.a2.v1
Defline:  (1 of 36) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1604
Name:  ? Glyma.13G160400 Secondary Identifier:  ? PAC:30504755
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G160400 0.5kb upstream 0.5kb upstream 2840 true Chr13: 27606020-27608859 Glycine max
Glyma.13G160400 0.5kb upstream 0.5kb upstream 500 false Chr13: 27608360-27608859 Glycine max
Glyma.13G160400 0.5kb downstream 0.5kb downstream 2840 true Chr13: 27605520-27608359 Glycine max
Glyma.13G160400 0.5kb downstream 0.5kb downstream 500 false Chr13: 27605520-27606019 Glycine max
Glyma.13G160400 1.0kb upstream 1.0kb upstream 3340 true Chr13: 27606020-27609359 Glycine max
Glyma.13G160400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27608360-27609359 Glycine max
Glyma.13G160400 1.0kb downstream 1.0kb downstream 3340 true Chr13: 27605020-27608359 Glycine max
Glyma.13G160400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27605020-27606019 Glycine max
Glyma.13G160400 2.0kb upstream 2.0kb upstream 4340 true Chr13: 27606020-27610359 Glycine max
Glyma.13G160400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27608360-27610359 Glycine max
Glyma.13G160400 2.0kb downstream 2.0kb downstream 4340 true Chr13: 27604020-27608359 Glycine max
Glyma.13G160400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27604020-27606019 Glycine max
Glyma.13G160400 5.0kb upstream 5.0kb upstream 7340 true Chr13: 27606020-27613359 Glycine max
Glyma.13G160400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27608360-27613359 Glycine max
Glyma.13G160400 5.0kb downstream 5.0kb downstream 7340 true Chr13: 27601020-27608359 Glycine max
Glyma.13G160400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27601020-27606019 Glycine max
Glyma.13G160400 10.0kb upstream 10.0kb upstream 12340 true Chr13: 27606020-27618359 Glycine max
Glyma.13G160400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27608360-27618359 Glycine max
Glyma.13G160400 10.0kb downstream 10.0kb downstream 12340 true Chr13: 27596020-27608359 Glycine max
Glyma.13G160400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27596020-27606019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314397 5265 Fabidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5931 0.0 37.7154   Low
cufflinks 149.46 0.0 452.472 High  
cufflinks 101.275 0.0 289.7 High  
cufflinks 69.6634 0.0 191.791 High  
cufflinks 704.188 0.0 3198.26 High High
cufflinks 215.537 0.0 699.043 High  
cufflinks 255.014 0.0 857.578 High  
cufflinks 163.315 0.0 504.133 High  
cufflinks 92.8218 0.0 263.84 High  
cufflinks 262.495     High  
cufflinks 3.666       Low
cufflinks 76.874     High  
cufflinks 195.538     High  
cufflinks 313.218     High  
cufflinks 2.193       Low
cufflinks 357.851     High  
cufflinks 11.583     High  
cufflinks 356.647     High  
cufflinks 68.12     High  
cufflinks 312.607     High  
cufflinks 12.139     High  
cufflinks 273.14     High  
cufflinks 299.814     High  
cufflinks 1.866       Low
cufflinks 292.219     High  
cufflinks 26.631     High  

0 Strain