Gene : Glyma.13G165500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF158 - RING FINGER DOMAIN-CONTAINING Genomic Order:  1655
Name:  ? Glyma.13G165500 Secondary Identifier:  ? PAC:30503413
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G165500 0.5kb upstream 0.5kb upstream 4423 true Chr13: 28030288-28034710 Glycine max
Glyma.13G165500 0.5kb upstream 0.5kb upstream 500 false Chr13: 28030288-28030787 Glycine max
Glyma.13G165500 0.5kb downstream 0.5kb downstream 4423 true Chr13: 28030788-28035210 Glycine max
Glyma.13G165500 0.5kb downstream 0.5kb downstream 500 false Chr13: 28034711-28035210 Glycine max
Glyma.13G165500 1.0kb upstream 1.0kb upstream 4923 true Chr13: 28029788-28034710 Glycine max
Glyma.13G165500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28029788-28030787 Glycine max
Glyma.13G165500 1.0kb downstream 1.0kb downstream 4923 true Chr13: 28030788-28035710 Glycine max
Glyma.13G165500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28034711-28035710 Glycine max
Glyma.13G165500 2.0kb upstream 2.0kb upstream 5923 true Chr13: 28028788-28034710 Glycine max
Glyma.13G165500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28028788-28030787 Glycine max
Glyma.13G165500 2.0kb downstream 2.0kb downstream 5923 true Chr13: 28030788-28036710 Glycine max
Glyma.13G165500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28034711-28036710 Glycine max
Glyma.13G165500 5.0kb upstream 5.0kb upstream 8923 true Chr13: 28025788-28034710 Glycine max
Glyma.13G165500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28025788-28030787 Glycine max
Glyma.13G165500 5.0kb downstream 5.0kb downstream 8923 true Chr13: 28030788-28039710 Glycine max
Glyma.13G165500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28034711-28039710 Glycine max
Glyma.13G165500 10.0kb upstream 10.0kb upstream 13923 true Chr13: 28020788-28034710 Glycine max
Glyma.13G165500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28020788-28030787 Glycine max
Glyma.13G165500 10.0kb downstream 10.0kb downstream 13923 true Chr13: 28030788-28044710 Glycine max
Glyma.13G165500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28034711-28044710 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302688 5265 Fabidae View MSA
124070829 5270 Rosid View MSA
123748594 5271 Pentapetalae View MSA
122794365 5272 Eudicot View MSA
122048558 5273 Angiosperm View MSA
121348267 5274 Embryophyte View MSA
123380799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.97067 0.0 24.2465    
cufflinks 5.307 0.0 14.9097   Low
cufflinks 11.0098 0.0 29.4741    
cufflinks 7.2841 0.0 19.9193    
cufflinks 8.24196 0.0 22.3916    
cufflinks 16.4982 0.0 44.0417   High
cufflinks 4.41602 0.0 12.7145   Low
cufflinks 18.6994 0.0 50.0476   High
cufflinks 7.52546 0.0 20.537    
cufflinks 5.094       High
cufflinks 3.291        
cufflinks 4.104        
cufflinks 5.631       High
cufflinks 3.665        
cufflinks 2.018       Low
cufflinks 3.784        
cufflinks 1.921       Low
cufflinks 2.505        
cufflinks 4.63        
cufflinks 3.005        
cufflinks 2.705        
cufflinks 3.737        
cufflinks 2.609        
cufflinks 6.026       High
cufflinks 3.377        
cufflinks 3.97        

0 Strain