Gene : Glyma.13G174000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF5 - AUXIN RESPONSE FACTOR 3 Genomic Order:  1740
Name:  ? Glyma.13G174000 Secondary Identifier:  ? PAC:30506055
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G174000 0.5kb upstream 0.5kb upstream 6555 true Chr13: 28805002-28811556 Glycine max
Glyma.13G174000 0.5kb upstream 0.5kb upstream 500 false Chr13: 28805002-28805501 Glycine max
Glyma.13G174000 0.5kb downstream 0.5kb downstream 6555 true Chr13: 28805502-28812056 Glycine max
Glyma.13G174000 0.5kb downstream 0.5kb downstream 500 false Chr13: 28811557-28812056 Glycine max
Glyma.13G174000 1.0kb upstream 1.0kb upstream 7055 true Chr13: 28804502-28811556 Glycine max
Glyma.13G174000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28804502-28805501 Glycine max
Glyma.13G174000 1.0kb downstream 1.0kb downstream 7055 true Chr13: 28805502-28812556 Glycine max
Glyma.13G174000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28811557-28812556 Glycine max
Glyma.13G174000 2.0kb upstream 2.0kb upstream 8055 true Chr13: 28803502-28811556 Glycine max
Glyma.13G174000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28803502-28805501 Glycine max
Glyma.13G174000 2.0kb downstream 2.0kb downstream 8055 true Chr13: 28805502-28813556 Glycine max
Glyma.13G174000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28811557-28813556 Glycine max
Glyma.13G174000 5.0kb upstream 5.0kb upstream 11055 true Chr13: 28800502-28811556 Glycine max
Glyma.13G174000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28800502-28805501 Glycine max
Glyma.13G174000 5.0kb downstream 5.0kb downstream 11055 true Chr13: 28805502-28816556 Glycine max
Glyma.13G174000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28811557-28816556 Glycine max
Glyma.13G174000 10.0kb upstream 10.0kb upstream 16055 true Chr13: 28795502-28811556 Glycine max
Glyma.13G174000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28795502-28805501 Glycine max
Glyma.13G174000 10.0kb downstream 10.0kb downstream 16055 true Chr13: 28805502-28821556 Glycine max
Glyma.13G174000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28811557-28821556 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309697 5265 Fabidae View MSA
124066070 5270 Rosid View MSA
123743796 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.78686 0.0 15.0302    
cufflinks 28.6846 0.0 116.755 High High
cufflinks 1.46574 0.0 6.72218   Low
cufflinks 7.17308 0.0 26.1963    
cufflinks 7.96547 0.0 29.0305    
cufflinks 2.66858 0.0 9.67733    
cufflinks 9.63758 0.0 34.8194    
cufflinks 37.6058 0.0 162.189 High High
cufflinks 8.64803 0.0 30.7823    
cufflinks 6.644       High
cufflinks 0.088       Low
cufflinks 0.806        
cufflinks 1.022        
cufflinks 0.384        
cufflinks 0.48        
cufflinks 1.914        
cufflinks 0.924        
cufflinks 2.168        
cufflinks 6.116       High
cufflinks 1.335        
cufflinks 0.206       Low
cufflinks 1.851        
cufflinks 1.576        
cufflinks 0.228       Low
cufflinks 1.303        
cufflinks 0.296        

0 Strain