Gene : Glyma.13G131800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24098:SF12 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  1318
Name:  ? Glyma.13G131800 Secondary Identifier:  ? PAC:30504315
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G131800 0.5kb upstream 0.5kb upstream 10305 true Chr13: 24433082-24443386 Glycine max
Glyma.13G131800 0.5kb upstream 0.5kb upstream 500 false Chr13: 24433082-24433581 Glycine max
Glyma.13G131800 0.5kb downstream 0.5kb downstream 10305 true Chr13: 24433582-24443886 Glycine max
Glyma.13G131800 0.5kb downstream 0.5kb downstream 500 false Chr13: 24443387-24443886 Glycine max
Glyma.13G131800 1.0kb upstream 1.0kb upstream 10805 true Chr13: 24432582-24443386 Glycine max
Glyma.13G131800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24432582-24433581 Glycine max
Glyma.13G131800 1.0kb downstream 1.0kb downstream 10805 true Chr13: 24433582-24444386 Glycine max
Glyma.13G131800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24443387-24444386 Glycine max
Glyma.13G131800 2.0kb upstream 2.0kb upstream 11805 true Chr13: 24431582-24443386 Glycine max
Glyma.13G131800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24431582-24433581 Glycine max
Glyma.13G131800 2.0kb downstream 2.0kb downstream 11805 true Chr13: 24433582-24445386 Glycine max
Glyma.13G131800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24443387-24445386 Glycine max
Glyma.13G131800 5.0kb upstream 5.0kb upstream 14805 true Chr13: 24428582-24443386 Glycine max
Glyma.13G131800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24428582-24433581 Glycine max
Glyma.13G131800 5.0kb downstream 5.0kb downstream 14805 true Chr13: 24433582-24448386 Glycine max
Glyma.13G131800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24443387-24448386 Glycine max
Glyma.13G131800 10.0kb upstream 10.0kb upstream 19805 true Chr13: 24423582-24443386 Glycine max
Glyma.13G131800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24423582-24433581 Glycine max
Glyma.13G131800 10.0kb downstream 10.0kb downstream 19805 true Chr13: 24433582-24453386 Glycine max
Glyma.13G131800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24443387-24453386 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306538 5265 Fabidae View MSA
124067394 5270 Rosid View MSA
123737655 5271 Pentapetalae View MSA
122795186 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.912 0.0 38.4003    
cufflinks 6.56858 0.0 22.9972   Low
cufflinks 15.2793 0.0 55.4583   High
cufflinks 9.11546 0.0 31.5325    
cufflinks 7.5067 0.0 26.0727    
cufflinks 7.03349 0.0 21.047    
cufflinks 7.17798 0.0 21.2764    
cufflinks 8.85532 0.0 30.7837    
cufflinks 7.86327 0.0 27.3525    
cufflinks 1.36       Low
cufflinks 2.164        
cufflinks 2.91       High
cufflinks 1.385       Low
cufflinks 1.634        
cufflinks 2.198        
cufflinks 1.927        
cufflinks 1.507       Low
cufflinks 2.307        
cufflinks 1.573       Low
cufflinks 2.865       High
cufflinks 2.171        
cufflinks 2.708       High
cufflinks 1.841        
cufflinks 2.646       High
cufflinks 2.55        
cufflinks 1.85        

0 Strain