Gene : Glyma.13G136500 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR12603:SF3 - RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN Genomic Order:  1365
Name:  ? Glyma.13G136500 Secondary Identifier:  ? PAC:30503636
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G136500 0.5kb upstream 0.5kb upstream 6639 true Chr13: 24910198-24916836 Glycine max
Glyma.13G136500 0.5kb upstream 0.5kb upstream 500 false Chr13: 24916337-24916836 Glycine max
Glyma.13G136500 0.5kb downstream 0.5kb downstream 6639 true Chr13: 24909698-24916336 Glycine max
Glyma.13G136500 0.5kb downstream 0.5kb downstream 500 false Chr13: 24909698-24910197 Glycine max
Glyma.13G136500 1.0kb upstream 1.0kb upstream 7139 true Chr13: 24910198-24917336 Glycine max
Glyma.13G136500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24916337-24917336 Glycine max
Glyma.13G136500 1.0kb downstream 1.0kb downstream 7139 true Chr13: 24909198-24916336 Glycine max
Glyma.13G136500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24909198-24910197 Glycine max
Glyma.13G136500 2.0kb upstream 2.0kb upstream 8139 true Chr13: 24910198-24918336 Glycine max
Glyma.13G136500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24916337-24918336 Glycine max
Glyma.13G136500 2.0kb downstream 2.0kb downstream 8139 true Chr13: 24908198-24916336 Glycine max
Glyma.13G136500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24908198-24910197 Glycine max
Glyma.13G136500 5.0kb upstream 5.0kb upstream 11139 true Chr13: 24910198-24921336 Glycine max
Glyma.13G136500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24916337-24921336 Glycine max
Glyma.13G136500 5.0kb downstream 5.0kb downstream 11139 true Chr13: 24905198-24916336 Glycine max
Glyma.13G136500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24905198-24910197 Glycine max
Glyma.13G136500 10.0kb upstream 10.0kb upstream 16139 true Chr13: 24910198-24926336 Glycine max
Glyma.13G136500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24916337-24926336 Glycine max
Glyma.13G136500 10.0kb downstream 10.0kb downstream 16139 true Chr13: 24900198-24916336 Glycine max
Glyma.13G136500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24900198-24910197 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298501 5265 Fabidae View MSA
124065287 5270 Rosid View MSA
123744050 5271 Pentapetalae View MSA
122786724 5272 Eudicot View MSA
122047613 5273 Angiosperm View MSA
121310773 5274 Embryophyte View MSA
123425722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.07894 0.0 35.8608    
cufflinks 12.5389 0.0 56.8516   High
cufflinks 9.60867 0.0 46.9625    
cufflinks 9.15577 0.0 47.782    
cufflinks 6.43404 0.0 30.0829    
cufflinks 4.71912 0.0 22.7171   Low
cufflinks 12.2903 0.0 60.6272   High
cufflinks 7.38559 0.0 39.1522    
cufflinks 7.04244 0.0 38.0954    
cufflinks 0.598        
cufflinks 0.4       Low
cufflinks 1.217        
cufflinks 0.493        
cufflinks 0.602        
cufflinks 0.689        
cufflinks 1.076        
cufflinks 0.239       Low
cufflinks 1.518       High
cufflinks 1.306       High
cufflinks 1.192        
cufflinks 0.456        
cufflinks 1.145        
cufflinks 1.11        
cufflinks 0.446        
cufflinks 1.177        
cufflinks 0.343       Low

0 Strain