Gene : Glyma.13G116200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13343:SF17 - CELLULAR REPRESSOR OF E1A-STIMULATED GENES, ISOFORM A Genomic Order:  1162
Name:  ? Glyma.13G116200 Secondary Identifier:  ? PAC:30500546
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G116200 0.5kb upstream 0.5kb upstream 3165 true Chr13: 22966129-22969293 Glycine max
Glyma.13G116200 0.5kb upstream 0.5kb upstream 500 false Chr13: 22968794-22969293 Glycine max
Glyma.13G116200 0.5kb downstream 0.5kb downstream 3165 true Chr13: 22965629-22968793 Glycine max
Glyma.13G116200 0.5kb downstream 0.5kb downstream 500 false Chr13: 22965629-22966128 Glycine max
Glyma.13G116200 1.0kb upstream 1.0kb upstream 3665 true Chr13: 22966129-22969793 Glycine max
Glyma.13G116200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 22968794-22969793 Glycine max
Glyma.13G116200 1.0kb downstream 1.0kb downstream 3665 true Chr13: 22965129-22968793 Glycine max
Glyma.13G116200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 22965129-22966128 Glycine max
Glyma.13G116200 2.0kb upstream 2.0kb upstream 4665 true Chr13: 22966129-22970793 Glycine max
Glyma.13G116200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 22968794-22970793 Glycine max
Glyma.13G116200 2.0kb downstream 2.0kb downstream 4665 true Chr13: 22964129-22968793 Glycine max
Glyma.13G116200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 22964129-22966128 Glycine max
Glyma.13G116200 5.0kb upstream 5.0kb upstream 7665 true Chr13: 22966129-22973793 Glycine max
Glyma.13G116200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 22968794-22973793 Glycine max
Glyma.13G116200 5.0kb downstream 5.0kb downstream 7665 true Chr13: 22961129-22968793 Glycine max
Glyma.13G116200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 22961129-22966128 Glycine max
Glyma.13G116200 10.0kb upstream 10.0kb upstream 12665 true Chr13: 22966129-22978793 Glycine max
Glyma.13G116200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 22968794-22978793 Glycine max
Glyma.13G116200 10.0kb downstream 10.0kb downstream 12665 true Chr13: 22956129-22968793 Glycine max
Glyma.13G116200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 22956129-22966128 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304704 5265 Fabidae View MSA
124060468 5270 Rosid View MSA
123752087 5271 Pentapetalae View MSA
122795497 5272 Eudicot View MSA
122043894 5273 Angiosperm View MSA
121347354 5274 Embryophyte View MSA
123424042 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.0531 0.0 82.6609 High  
cufflinks 17.3373 0.0 53.8016   Low
cufflinks 57.2825 0.0 246.884 High High
cufflinks 32.0264 0.0 135.979 High  
cufflinks 21.0445 0.0 63.112 High  
cufflinks 59.0426 0.0 245.457 High High
cufflinks 21.4858 0.0 74.669    
cufflinks 36.816 0.0 124.071 High  
cufflinks 25.8688 0.0 108.306 High  
cufflinks 2.973        
cufflinks 3.525        
cufflinks 4.46       High
cufflinks 2.319        
cufflinks 1.372       Low
cufflinks 2.211        
cufflinks 2.92        
cufflinks 2.318        
cufflinks 2.597        
cufflinks 2.246        
cufflinks 4.233       High
cufflinks 2.862        
cufflinks 3.565        
cufflinks 2.014       Low
cufflinks 3.508        
cufflinks 3.838       High
cufflinks 2.786        

0 Strain