Gene : Glyma.13G056600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11926//PTHR11926:SF400 - GLUCOSYL/GLUCURONOSYL TRANSFERASES Genomic Order:  566
Name:  ? Glyma.13G056600 Secondary Identifier:  ? PAC:30501503
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2902 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G056600 0.5kb upstream 0.5kb upstream 4902 true Chr13: 15417052-15421953 Glycine max
Glyma.13G056600 0.5kb upstream 0.5kb upstream 500 false Chr13: 15417052-15417551 Glycine max
Glyma.13G056600 0.5kb downstream 0.5kb downstream 4902 true Chr13: 15417552-15422453 Glycine max
Glyma.13G056600 0.5kb downstream 0.5kb downstream 500 false Chr13: 15421954-15422453 Glycine max
Glyma.13G056600 1.0kb upstream 1.0kb upstream 5402 true Chr13: 15416552-15421953 Glycine max
Glyma.13G056600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15416552-15417551 Glycine max
Glyma.13G056600 1.0kb downstream 1.0kb downstream 5402 true Chr13: 15417552-15422953 Glycine max
Glyma.13G056600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15421954-15422953 Glycine max
Glyma.13G056600 2.0kb upstream 2.0kb upstream 6402 true Chr13: 15415552-15421953 Glycine max
Glyma.13G056600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15415552-15417551 Glycine max
Glyma.13G056600 2.0kb downstream 2.0kb downstream 6402 true Chr13: 15417552-15423953 Glycine max
Glyma.13G056600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15421954-15423953 Glycine max
Glyma.13G056600 5.0kb upstream 5.0kb upstream 9402 true Chr13: 15412552-15421953 Glycine max
Glyma.13G056600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15412552-15417551 Glycine max
Glyma.13G056600 5.0kb downstream 5.0kb downstream 9402 true Chr13: 15417552-15426953 Glycine max
Glyma.13G056600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15421954-15426953 Glycine max
Glyma.13G056600 10.0kb upstream 10.0kb upstream 14402 true Chr13: 15407552-15421953 Glycine max
Glyma.13G056600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15407552-15417551 Glycine max
Glyma.13G056600 10.0kb downstream 10.0kb downstream 14402 true Chr13: 15417552-15431953 Glycine max
Glyma.13G056600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15421954-15431953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250300 5265 Fabidae View MSA
124075559 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1855 0.0 43.8152    
cufflinks 3.10244 0.0 15.7166   Low
cufflinks 9.53614 0.0 37.8637    
cufflinks 7.72768 0.0 28.7331    
cufflinks 6.22939 0.0 27.9654    
cufflinks 5.07398 0.0 21.3793    
cufflinks 46.3383 0.0 193.703 High High
cufflinks 7.4794 0.0 31.7579    
cufflinks 8.72968 0.0 35.8448    
cufflinks 0.615        
cufflinks 8.019     High High
cufflinks 0.951        
cufflinks 0.296       Low
cufflinks 1.088        
cufflinks 6.712     High High
cufflinks 0.856        
cufflinks 0.588        
cufflinks 0.562        
cufflinks 0.285       Low
cufflinks 1.245        
cufflinks 6.222     High High
cufflinks 0.468        
cufflinks 0.155       Low
cufflinks 4.417       High
cufflinks 0.875        
cufflinks 1.605        

0 Strain