Gene : Glyma.13G034200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11260:SF274 - GLUTATHIONE S-TRANSFERASE TCHQD Genomic Order:  342
Name:  ? Glyma.13G034200 Secondary Identifier:  ? PAC:30504411
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6842 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G034200 0.5kb upstream 0.5kb upstream 3500 true Chr13: 10705589-10709088 Glycine max
Glyma.13G034200 0.5kb upstream 0.5kb upstream 500 false Chr13: 10708589-10709088 Glycine max
Glyma.13G034200 0.5kb downstream 0.5kb downstream 3500 true Chr13: 10705089-10708588 Glycine max
Glyma.13G034200 0.5kb downstream 0.5kb downstream 500 false Chr13: 10705089-10705588 Glycine max
Glyma.13G034200 1.0kb upstream 1.0kb upstream 4000 true Chr13: 10705589-10709588 Glycine max
Glyma.13G034200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 10708589-10709588 Glycine max
Glyma.13G034200 1.0kb downstream 1.0kb downstream 4000 true Chr13: 10704589-10708588 Glycine max
Glyma.13G034200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 10704589-10705588 Glycine max
Glyma.13G034200 2.0kb upstream 2.0kb upstream 5000 true Chr13: 10705589-10710588 Glycine max
Glyma.13G034200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 10708589-10710588 Glycine max
Glyma.13G034200 2.0kb downstream 2.0kb downstream 5000 true Chr13: 10703589-10708588 Glycine max
Glyma.13G034200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 10703589-10705588 Glycine max
Glyma.13G034200 5.0kb upstream 5.0kb upstream 8000 true Chr13: 10705589-10713588 Glycine max
Glyma.13G034200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 10708589-10713588 Glycine max
Glyma.13G034200 5.0kb downstream 5.0kb downstream 8000 true Chr13: 10700589-10708588 Glycine max
Glyma.13G034200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 10700589-10705588 Glycine max
Glyma.13G034200 10.0kb upstream 10.0kb upstream 13000 true Chr13: 10705589-10718588 Glycine max
Glyma.13G034200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 10708589-10718588 Glycine max
Glyma.13G034200 10.0kb downstream 10.0kb downstream 13000 true Chr13: 10695589-10708588 Glycine max
Glyma.13G034200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 10695589-10705588 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311518 5265 Fabidae View MSA
124062049 5270 Rosid View MSA
123737058 5271 Pentapetalae View MSA
122790609 5272 Eudicot View MSA
122046424 5273 Angiosperm View MSA
121345168 5274 Embryophyte View MSA
123380168 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.50111 0.0 26.1673   High
cufflinks 1.28198 0.0 8.90432    
cufflinks 5.95501 0.0 24.6292   High
cufflinks 1.64055 0.0 8.67318    
cufflinks 1.18515 0.0 8.60819    
cufflinks 2.72254 0.0 14.5452    
cufflinks 1.12697 0.0 7.7684    
cufflinks 1.90202 0.0 9.67486    
cufflinks 1.47996 0.0 8.04981    
cufflinks 1.095        
cufflinks 1.461       High
cufflinks 1.996       High
cufflinks 0.997        
cufflinks 0.172       Low
cufflinks 0.745        
cufflinks 0.619        
cufflinks 1.579       High
cufflinks 1.296        
cufflinks 0.403       Low
cufflinks 0.531        
cufflinks 0.67        
cufflinks 0.521        
cufflinks 0.569        
cufflinks 0.746        
cufflinks 0.625        
cufflinks 1.234        

0 Strain