Gene : Glyma.12G222700 G. max Wm82.a2.v1
Defline:  (1 of 214) KOG0472 - Leucine-rich repeat protein Genomic Order:  2227
Name:  ? Glyma.12G222700 Secondary Identifier:  ? PAC:30546150
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G222700 0.5kb upstream 0.5kb upstream 13938 true Chr12: 38238390-38252327 Glycine max
Glyma.12G222700 0.5kb upstream 0.5kb upstream 500 false Chr12: 38251828-38252327 Glycine max
Glyma.12G222700 0.5kb downstream 0.5kb downstream 13938 true Chr12: 38237890-38251827 Glycine max
Glyma.12G222700 0.5kb downstream 0.5kb downstream 500 false Chr12: 38237890-38238389 Glycine max
Glyma.12G222700 1.0kb upstream 1.0kb upstream 14438 true Chr12: 38238390-38252827 Glycine max
Glyma.12G222700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 38251828-38252827 Glycine max
Glyma.12G222700 1.0kb downstream 1.0kb downstream 14438 true Chr12: 38237390-38251827 Glycine max
Glyma.12G222700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 38237390-38238389 Glycine max
Glyma.12G222700 2.0kb upstream 2.0kb upstream 15438 true Chr12: 38238390-38253827 Glycine max
Glyma.12G222700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 38251828-38253827 Glycine max
Glyma.12G222700 2.0kb downstream 2.0kb downstream 15438 true Chr12: 38236390-38251827 Glycine max
Glyma.12G222700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 38236390-38238389 Glycine max
Glyma.12G222700 5.0kb upstream 5.0kb upstream 18438 true Chr12: 38238390-38256827 Glycine max
Glyma.12G222700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 38251828-38256827 Glycine max
Glyma.12G222700 5.0kb downstream 5.0kb downstream 18438 true Chr12: 38233390-38251827 Glycine max
Glyma.12G222700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 38233390-38238389 Glycine max
Glyma.12G222700 10.0kb upstream 10.0kb upstream 23438 true Chr12: 38238390-38261827 Glycine max
Glyma.12G222700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 38251828-38261827 Glycine max
Glyma.12G222700 10.0kb downstream 10.0kb downstream 23438 true Chr12: 38228390-38251827 Glycine max
Glyma.12G222700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 38228390-38238389 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307241 5265 Fabidae View MSA
124061452 5270 Rosid View MSA
123738353 5271 Pentapetalae View MSA
122792030 5272 Eudicot View MSA
122042195 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121345842 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.21527 0.0 6.89287   Low
cufflinks 4.85829 0.0 13.6314    
cufflinks 2.34656 0.0 7.19175   Low
cufflinks 3.39002 0.0 9.91358    
cufflinks 6.06767 0.0 16.7097   High
cufflinks 3.44257 0.0 10.0521    
cufflinks 4.44852 0.0 12.6442    
cufflinks 6.11806 0.0 16.788   High
cufflinks 4.54726 0.0 12.8371    
cufflinks 0.857        
cufflinks 0.236       Low
cufflinks 0.621        
cufflinks 1.201        
cufflinks 1.458       High
cufflinks 0.343       Low
cufflinks 1.093        
cufflinks 0.552        
cufflinks 1.258       High
cufflinks 1.099        
cufflinks 0.904        
cufflinks 0.497        
cufflinks 0.971        
cufflinks 0.896        
cufflinks 0.398       Low
cufflinks 1.028        
cufflinks 0.602        

0 Strain