Gene : Glyma.12G183800 G. max Wm82.a2.v1
Defline:  (1 of 21) PTHR10634 - AN1-TYPE ZINC FINGER PROTEIN Genomic Order:  1838
Name:  ? Glyma.12G183800 Secondary Identifier:  ? PAC:30548367
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G183800 0.5kb upstream 0.5kb upstream 1737 true Chr12: 34487027-34488763 Glycine max
Glyma.12G183800 0.5kb upstream 0.5kb upstream 500 false Chr12: 34487027-34487526 Glycine max
Glyma.12G183800 0.5kb downstream 0.5kb downstream 1737 true Chr12: 34487527-34489263 Glycine max
Glyma.12G183800 0.5kb downstream 0.5kb downstream 500 false Chr12: 34488764-34489263 Glycine max
Glyma.12G183800 1.0kb upstream 1.0kb upstream 2237 true Chr12: 34486527-34488763 Glycine max
Glyma.12G183800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34486527-34487526 Glycine max
Glyma.12G183800 1.0kb downstream 1.0kb downstream 2237 true Chr12: 34487527-34489763 Glycine max
Glyma.12G183800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34488764-34489763 Glycine max
Glyma.12G183800 2.0kb upstream 2.0kb upstream 3237 true Chr12: 34485527-34488763 Glycine max
Glyma.12G183800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34485527-34487526 Glycine max
Glyma.12G183800 2.0kb downstream 2.0kb downstream 3237 true Chr12: 34487527-34490763 Glycine max
Glyma.12G183800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34488764-34490763 Glycine max
Glyma.12G183800 5.0kb upstream 5.0kb upstream 6237 true Chr12: 34482527-34488763 Glycine max
Glyma.12G183800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34482527-34487526 Glycine max
Glyma.12G183800 5.0kb downstream 5.0kb downstream 6237 true Chr12: 34487527-34493763 Glycine max
Glyma.12G183800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34488764-34493763 Glycine max
Glyma.12G183800 10.0kb upstream 10.0kb upstream 11237 true Chr12: 34477527-34488763 Glycine max
Glyma.12G183800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34477527-34487526 Glycine max
Glyma.12G183800 10.0kb downstream 10.0kb downstream 11237 true Chr12: 34487527-34498763 Glycine max
Glyma.12G183800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34488764-34498763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310911 5265 Fabidae View MSA
124064566 5270 Rosid View MSA
123746917 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.7724 0.0 160.909 High  
cufflinks 22.6207 0.0 81.3993 High  
cufflinks 116.373 0.0 485.18 High High
cufflinks 20.7737 0.0 75.2703 High Low
cufflinks 52.9562 0.0 191.681 High  
cufflinks 93.3241 0.0 374.147 High High
cufflinks 16.736 0.0 63.9228   Low
cufflinks 46.8847 0.0 167.02 High  
cufflinks 80.8438 0.0 312.0 High  
cufflinks 31.572     High  
cufflinks 156.065     High High
cufflinks 40.37     High  
cufflinks 21.875     High  
cufflinks 12.896     High Low
cufflinks 159.518     High High
cufflinks 22.761     High  
cufflinks 173.754     High High
cufflinks 18.571     High  
cufflinks 8.901     High Low
cufflinks 20.171     High  
cufflinks 168.377     High High
cufflinks 16.705     High  
cufflinks 14.758     High  
cufflinks 101.985     High  
cufflinks 18.444     High  
cufflinks 177.281     High High

0 Strain