Gene : Glyma.12G183300 G. max Wm82.a2.v1
Defline:  (1 of 4) 1.2.1.50//1.2.1.84 - Long-chain-fatty-acyl-CoA reductase / Acyl-CoA reductase Genomic Order:  1833
Name:  ? Glyma.12G183300 Secondary Identifier:  ? PAC:30547235
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6733 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G183300 0.5kb upstream 0.5kb upstream 5232 true Chr12: 34411339-34416570 Glycine max
Glyma.12G183300 0.5kb upstream 0.5kb upstream 500 false Chr12: 34416071-34416570 Glycine max
Glyma.12G183300 0.5kb downstream 0.5kb downstream 5232 true Chr12: 34410839-34416070 Glycine max
Glyma.12G183300 0.5kb downstream 0.5kb downstream 500 false Chr12: 34410839-34411338 Glycine max
Glyma.12G183300 1.0kb upstream 1.0kb upstream 5732 true Chr12: 34411339-34417070 Glycine max
Glyma.12G183300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 34416071-34417070 Glycine max
Glyma.12G183300 1.0kb downstream 1.0kb downstream 5732 true Chr12: 34410339-34416070 Glycine max
Glyma.12G183300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 34410339-34411338 Glycine max
Glyma.12G183300 2.0kb upstream 2.0kb upstream 6732 true Chr12: 34411339-34418070 Glycine max
Glyma.12G183300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 34416071-34418070 Glycine max
Glyma.12G183300 2.0kb downstream 2.0kb downstream 6732 true Chr12: 34409339-34416070 Glycine max
Glyma.12G183300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 34409339-34411338 Glycine max
Glyma.12G183300 5.0kb upstream 5.0kb upstream 9732 true Chr12: 34411339-34421070 Glycine max
Glyma.12G183300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 34416071-34421070 Glycine max
Glyma.12G183300 5.0kb downstream 5.0kb downstream 9732 true Chr12: 34406339-34416070 Glycine max
Glyma.12G183300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 34406339-34411338 Glycine max
Glyma.12G183300 10.0kb upstream 10.0kb upstream 14732 true Chr12: 34411339-34426070 Glycine max
Glyma.12G183300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 34416071-34426070 Glycine max
Glyma.12G183300 10.0kb downstream 10.0kb downstream 14732 true Chr12: 34401339-34416070 Glycine max
Glyma.12G183300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 34401339-34411338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315442 5265 Fabidae View MSA
124062212 5270 Rosid View MSA
123752414 5271 Pentapetalae View MSA
122795882 5272 Eudicot View MSA
122043121 5273 Angiosperm View MSA
123429082 5275 Viridiplantae View MSA
121310075 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.28311 0.0 23.0899   High
cufflinks 0.177125 0.0 0.877733 Low  
cufflinks 0.0838767 0.0 0.33656 Low Low
cufflinks 4.20043 0.0 21.1773   High
cufflinks 2.23833 0.0 12.1344    
cufflinks 0.0924315 0.0 0.369178 Low Low
cufflinks 0.166742 0.0 0.649397 Low  
cufflinks 0.906463 0.0 5.16238    
cufflinks 0.034     Low  
cufflinks 0.007     Low Low
cufflinks 0.045     Low  
cufflinks 0.646       High
cufflinks 1.005       High
cufflinks 0.016     Low  
cufflinks 0.086     Low  
cufflinks 0.015     Low  
cufflinks 0.129        
cufflinks 0.581       High
cufflinks 0.008     Low Low
cufflinks 0.019     Low  
cufflinks 0.019     Low  
cufflinks 0.075     Low  
cufflinks 0.008     Low Low
cufflinks 0.045     Low  
cufflinks 0.063     Low  

0 Strain