Gene : Glyma.12G111200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31692:SF5 - EXPANSIN-B1-RELATED Genomic Order:  1112
Name:  ? Glyma.12G111200 Secondary Identifier:  ? PAC:30546603
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G111200 0.5kb upstream 0.5kb upstream 6134 true Chr12: 10632859-10638992 Glycine max
Glyma.12G111200 0.5kb upstream 0.5kb upstream 500 false Chr12: 10638493-10638992 Glycine max
Glyma.12G111200 0.5kb downstream 0.5kb downstream 6134 true Chr12: 10632359-10638492 Glycine max
Glyma.12G111200 0.5kb downstream 0.5kb downstream 500 false Chr12: 10632359-10632858 Glycine max
Glyma.12G111200 1.0kb upstream 1.0kb upstream 6634 true Chr12: 10632859-10639492 Glycine max
Glyma.12G111200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10638493-10639492 Glycine max
Glyma.12G111200 1.0kb downstream 1.0kb downstream 6634 true Chr12: 10631859-10638492 Glycine max
Glyma.12G111200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10631859-10632858 Glycine max
Glyma.12G111200 2.0kb upstream 2.0kb upstream 7634 true Chr12: 10632859-10640492 Glycine max
Glyma.12G111200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10638493-10640492 Glycine max
Glyma.12G111200 2.0kb downstream 2.0kb downstream 7634 true Chr12: 10630859-10638492 Glycine max
Glyma.12G111200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10630859-10632858 Glycine max
Glyma.12G111200 5.0kb upstream 5.0kb upstream 10634 true Chr12: 10632859-10643492 Glycine max
Glyma.12G111200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10638493-10643492 Glycine max
Glyma.12G111200 5.0kb downstream 5.0kb downstream 10634 true Chr12: 10627859-10638492 Glycine max
Glyma.12G111200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10627859-10632858 Glycine max
Glyma.12G111200 10.0kb upstream 10.0kb upstream 15634 true Chr12: 10632859-10648492 Glycine max
Glyma.12G111200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10638493-10648492 Glycine max
Glyma.12G111200 10.0kb downstream 10.0kb downstream 15634 true Chr12: 10622859-10638492 Glycine max
Glyma.12G111200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10622859-10632858 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040952 5273 Angiosperm View MSA
122300814 5265 Fabidae View MSA
124061780 5270 Rosid View MSA
123742041 5271 Pentapetalae View MSA
122787625 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.355632 0.0 1.34986   Low
cufflinks 3.02251 0.0 9.7419    
cufflinks 0.582 0.0 2.16575   Low
cufflinks 1.6742 0.0 5.79354    
cufflinks 6.06823 0.0 17.5887   High
cufflinks 1.70289 0.0 5.85691    
cufflinks 0.691905 0.0 2.54174    
cufflinks 5.19307 0.0 15.4709   High
cufflinks 2.20577 0.0 7.37652    
cufflinks 0.866        
cufflinks 0.027     Low Low
cufflinks 0.184        
cufflinks 1.171        
cufflinks 1.315        
cufflinks 0.016     Low Low
cufflinks 1.357        
cufflinks 0.087        
cufflinks 0.484        
cufflinks 1.384        
cufflinks 0.977        
cufflinks 0.067        
cufflinks 1.315        
cufflinks 2.749       High
cufflinks 0.014     Low Low
cufflinks 1.037        
cufflinks 0.046     Low Low

0 Strain