Gene : Glyma.12G142200 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR27002:SF129 - INACTIVE G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SRK-RELATED Genomic Order:  1422
Name:  ? Glyma.12G142200 Secondary Identifier:  ? PAC:30548618
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G142200 0.5kb upstream 0.5kb upstream 4323 true Chr12: 18093716-18098038 Glycine max
Glyma.12G142200 0.5kb upstream 0.5kb upstream 500 false Chr12: 18093716-18094215 Glycine max
Glyma.12G142200 0.5kb downstream 0.5kb downstream 4323 true Chr12: 18094216-18098538 Glycine max
Glyma.12G142200 0.5kb downstream 0.5kb downstream 500 false Chr12: 18098039-18098538 Glycine max
Glyma.12G142200 1.0kb upstream 1.0kb upstream 4823 true Chr12: 18093216-18098038 Glycine max
Glyma.12G142200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 18093216-18094215 Glycine max
Glyma.12G142200 1.0kb downstream 1.0kb downstream 4823 true Chr12: 18094216-18099038 Glycine max
Glyma.12G142200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 18098039-18099038 Glycine max
Glyma.12G142200 2.0kb upstream 2.0kb upstream 5823 true Chr12: 18092216-18098038 Glycine max
Glyma.12G142200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 18092216-18094215 Glycine max
Glyma.12G142200 2.0kb downstream 2.0kb downstream 5823 true Chr12: 18094216-18100038 Glycine max
Glyma.12G142200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 18098039-18100038 Glycine max
Glyma.12G142200 5.0kb upstream 5.0kb upstream 8823 true Chr12: 18089216-18098038 Glycine max
Glyma.12G142200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 18089216-18094215 Glycine max
Glyma.12G142200 5.0kb downstream 5.0kb downstream 8823 true Chr12: 18094216-18103038 Glycine max
Glyma.12G142200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 18098039-18103038 Glycine max
Glyma.12G142200 10.0kb upstream 10.0kb upstream 13823 true Chr12: 18084216-18098038 Glycine max
Glyma.12G142200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 18084216-18094215 Glycine max
Glyma.12G142200 10.0kb downstream 10.0kb downstream 13823 true Chr12: 18094216-18108038 Glycine max
Glyma.12G142200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 18098039-18108038 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316485 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.75372 0.0 4.79503    
cufflinks 0.104126 0.0 0.404894 Low Low
cufflinks 0.496482 0.0 2.96169    
cufflinks 0.109353 0.0 0.779489 Low Low
cufflinks 1.55377 0.0 8.34163    
cufflinks 2.14763 0.0 11.1847    
cufflinks 6.33846 0.0 25.0052   High
cufflinks 0.0456669 0.0 0.183064 Low Low
cufflinks 2.48769 0.0 12.7051    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.254        
cufflinks 0.07     Low  
cufflinks 0.155        
cufflinks 0.01     Low Low
cufflinks 0.05     Low  
cufflinks 0.021     Low  
cufflinks 1.261       High
cufflinks 0.004     Low Low
cufflinks 0.007     Low Low
cufflinks 0.031     Low  
cufflinks 0.265        
cufflinks 0.052     Low  
cufflinks 0.042     Low  
cufflinks 0.6       High
cufflinks 0.035     Low  
cufflinks 0.802       High

0 Strain