Gene : Glyma.12G138500 G. max Wm82.a2.v1
Defline:  (1 of 58) PTHR11017//PTHR11017:SF155 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  1385
Name:  ? Glyma.12G138500 Secondary Identifier:  ? PAC:30548946
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G138500 0.5kb upstream 0.5kb upstream 1647 true Chr12: 16672850-16674496 Glycine max
Glyma.12G138500 0.5kb upstream 0.5kb upstream 500 false Chr12: 16673997-16674496 Glycine max
Glyma.12G138500 0.5kb downstream 0.5kb downstream 1647 true Chr12: 16672350-16673996 Glycine max
Glyma.12G138500 0.5kb downstream 0.5kb downstream 500 false Chr12: 16672350-16672849 Glycine max
Glyma.12G138500 1.0kb upstream 1.0kb upstream 2147 true Chr12: 16672850-16674996 Glycine max
Glyma.12G138500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 16673997-16674996 Glycine max
Glyma.12G138500 1.0kb downstream 1.0kb downstream 2147 true Chr12: 16671850-16673996 Glycine max
Glyma.12G138500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 16671850-16672849 Glycine max
Glyma.12G138500 2.0kb upstream 2.0kb upstream 3147 true Chr12: 16672850-16675996 Glycine max
Glyma.12G138500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 16673997-16675996 Glycine max
Glyma.12G138500 2.0kb downstream 2.0kb downstream 3147 true Chr12: 16670850-16673996 Glycine max
Glyma.12G138500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 16670850-16672849 Glycine max
Glyma.12G138500 5.0kb upstream 5.0kb upstream 6147 true Chr12: 16672850-16678996 Glycine max
Glyma.12G138500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 16673997-16678996 Glycine max
Glyma.12G138500 5.0kb downstream 5.0kb downstream 6147 true Chr12: 16667850-16673996 Glycine max
Glyma.12G138500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 16667850-16672849 Glycine max
Glyma.12G138500 10.0kb upstream 10.0kb upstream 11147 true Chr12: 16672850-16683996 Glycine max
Glyma.12G138500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 16673997-16683996 Glycine max
Glyma.12G138500 10.0kb downstream 10.0kb downstream 11147 true Chr12: 16662850-16673996 Glycine max
Glyma.12G138500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 16662850-16672849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608097 5273 Angiosperm Singleton cluster - no MSA
122239726 5265 Fabidae Singleton cluster - no MSA
123984918 5270 Rosid Singleton cluster - no MSA
123560391 5271 Pentapetalae Singleton cluster - no MSA
122595192 5272 Eudicot Singleton cluster - no MSA
120880372 5274 Embryophyte Singleton cluster - no MSA
122921239 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.258433 0.0 1.02872 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain