Gene : Glyma.12G056500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10634//PTHR10634:SF32 - AN1-TYPE ZINC FINGER PROTEIN Genomic Order:  565
Name:  ? Glyma.12G056500 Secondary Identifier:  ? PAC:30548384
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G056500 0.5kb upstream 0.5kb upstream 3212 true Chr12: 4113819-4117030 Glycine max
Glyma.12G056500 0.5kb upstream 0.5kb upstream 500 false Chr12: 4116531-4117030 Glycine max
Glyma.12G056500 0.5kb downstream 0.5kb downstream 3212 true Chr12: 4113319-4116530 Glycine max
Glyma.12G056500 0.5kb downstream 0.5kb downstream 500 false Chr12: 4113319-4113818 Glycine max
Glyma.12G056500 1.0kb upstream 1.0kb upstream 3712 true Chr12: 4113819-4117530 Glycine max
Glyma.12G056500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4116531-4117530 Glycine max
Glyma.12G056500 1.0kb downstream 1.0kb downstream 3712 true Chr12: 4112819-4116530 Glycine max
Glyma.12G056500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4112819-4113818 Glycine max
Glyma.12G056500 2.0kb upstream 2.0kb upstream 4712 true Chr12: 4113819-4118530 Glycine max
Glyma.12G056500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4116531-4118530 Glycine max
Glyma.12G056500 2.0kb downstream 2.0kb downstream 4712 true Chr12: 4111819-4116530 Glycine max
Glyma.12G056500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4111819-4113818 Glycine max
Glyma.12G056500 5.0kb upstream 5.0kb upstream 7712 true Chr12: 4113819-4121530 Glycine max
Glyma.12G056500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4116531-4121530 Glycine max
Glyma.12G056500 5.0kb downstream 5.0kb downstream 7712 true Chr12: 4108819-4116530 Glycine max
Glyma.12G056500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4108819-4113818 Glycine max
Glyma.12G056500 10.0kb upstream 10.0kb upstream 12712 true Chr12: 4113819-4126530 Glycine max
Glyma.12G056500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4116531-4126530 Glycine max
Glyma.12G056500 10.0kb downstream 10.0kb downstream 12712 true Chr12: 4103819-4116530 Glycine max
Glyma.12G056500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4103819-4113818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302926 5265 Fabidae View MSA
124074611 5270 Rosid View MSA
123751826 5271 Pentapetalae View MSA
122796829 5272 Eudicot View MSA
122050732 5273 Angiosperm View MSA
121349866 5274 Embryophyte View MSA
123428230 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.9063 0.0 275.803 High  
cufflinks 56.3329 0.0 205.797 High  
cufflinks 94.4461 0.0 392.767 High  
cufflinks 68.8009 0.0 260.755 High  
cufflinks 70.1554 0.0 267.902 High  
cufflinks 138.264 0.0 556.736 High High
cufflinks 41.8861 0.0 146.336 High Low
cufflinks 98.757 0.0 355.3 High  
cufflinks 76.0519 0.0 296.188 High  
cufflinks 9.174     High  
cufflinks 7.82     High  
cufflinks 9.844     High High
cufflinks 9.763     High  
cufflinks 8.192     High  
cufflinks 5.544     High Low
cufflinks 7.419     High  
cufflinks 9.465     High  
cufflinks 9.735     High  
cufflinks 7.98     High  
cufflinks 7.008     High  
cufflinks 7.259     High  
cufflinks 8.168     High  
cufflinks 9.325     High  
cufflinks 10.748     High High
cufflinks 7.875     High  
cufflinks 6.583     High Low

0 Strain