Gene : Glyma.12G070000 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  700
Name:  ? Glyma.12G070000 Secondary Identifier:  ? PAC:30548667
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G070000 0.5kb upstream 0.5kb upstream 1842 true Chr12: 5113528-5115369 Glycine max
Glyma.12G070000 0.5kb upstream 0.5kb upstream 500 false Chr12: 5114870-5115369 Glycine max
Glyma.12G070000 0.5kb downstream 0.5kb downstream 1842 true Chr12: 5113028-5114869 Glycine max
Glyma.12G070000 0.5kb downstream 0.5kb downstream 500 false Chr12: 5113028-5113527 Glycine max
Glyma.12G070000 1.0kb upstream 1.0kb upstream 2342 true Chr12: 5113528-5115869 Glycine max
Glyma.12G070000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5114870-5115869 Glycine max
Glyma.12G070000 1.0kb downstream 1.0kb downstream 2342 true Chr12: 5112528-5114869 Glycine max
Glyma.12G070000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5112528-5113527 Glycine max
Glyma.12G070000 2.0kb upstream 2.0kb upstream 3342 true Chr12: 5113528-5116869 Glycine max
Glyma.12G070000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5114870-5116869 Glycine max
Glyma.12G070000 2.0kb downstream 2.0kb downstream 3342 true Chr12: 5111528-5114869 Glycine max
Glyma.12G070000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5111528-5113527 Glycine max
Glyma.12G070000 5.0kb upstream 5.0kb upstream 6342 true Chr12: 5113528-5119869 Glycine max
Glyma.12G070000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5114870-5119869 Glycine max
Glyma.12G070000 5.0kb downstream 5.0kb downstream 6342 true Chr12: 5108528-5114869 Glycine max
Glyma.12G070000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5108528-5113527 Glycine max
Glyma.12G070000 10.0kb upstream 10.0kb upstream 11342 true Chr12: 5113528-5124869 Glycine max
Glyma.12G070000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5114870-5124869 Glycine max
Glyma.12G070000 10.0kb downstream 10.0kb downstream 11342 true Chr12: 5103528-5114869 Glycine max
Glyma.12G070000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5103528-5113527 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.427828 0.0 1.6261    
cufflinks 0.179536 0.0 0.707095 Low  
cufflinks 0.152124 0.0 0.60249 Low  
cufflinks 0.093394 0.0 0.376819 Low Low
cufflinks 5.00444 0.0 15.3865    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.06326 0.0 12.9039    
cufflinks 28.4742 0.0 75.9747 High High
cufflinks 3.96189 0.0 12.5701    
cufflinks 0.727        
cufflinks 0.148        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.768       High
cufflinks 0.109     Low  
cufflinks 0.065     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.386        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.649        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.773        

0 Strain