Gene : Glyma.12G077300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR27001:SF78 - RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE NCRK Genomic Order:  773
Name:  ? Glyma.12G077300 Secondary Identifier:  ? PAC:30545573
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G077300 0.5kb upstream 0.5kb upstream 7106 true Chr12: 5957770-5964875 Glycine max
Glyma.12G077300 0.5kb upstream 0.5kb upstream 500 false Chr12: 5964376-5964875 Glycine max
Glyma.12G077300 0.5kb downstream 0.5kb downstream 7106 true Chr12: 5957270-5964375 Glycine max
Glyma.12G077300 0.5kb downstream 0.5kb downstream 500 false Chr12: 5957270-5957769 Glycine max
Glyma.12G077300 1.0kb upstream 1.0kb upstream 7606 true Chr12: 5957770-5965375 Glycine max
Glyma.12G077300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5964376-5965375 Glycine max
Glyma.12G077300 1.0kb downstream 1.0kb downstream 7606 true Chr12: 5956770-5964375 Glycine max
Glyma.12G077300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5956770-5957769 Glycine max
Glyma.12G077300 2.0kb upstream 2.0kb upstream 8606 true Chr12: 5957770-5966375 Glycine max
Glyma.12G077300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5964376-5966375 Glycine max
Glyma.12G077300 2.0kb downstream 2.0kb downstream 8606 true Chr12: 5955770-5964375 Glycine max
Glyma.12G077300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5955770-5957769 Glycine max
Glyma.12G077300 5.0kb upstream 5.0kb upstream 11606 true Chr12: 5957770-5969375 Glycine max
Glyma.12G077300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5964376-5969375 Glycine max
Glyma.12G077300 5.0kb downstream 5.0kb downstream 11606 true Chr12: 5952770-5964375 Glycine max
Glyma.12G077300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5952770-5957769 Glycine max
Glyma.12G077300 10.0kb upstream 10.0kb upstream 16606 true Chr12: 5957770-5974375 Glycine max
Glyma.12G077300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5964376-5974375 Glycine max
Glyma.12G077300 10.0kb downstream 10.0kb downstream 16606 true Chr12: 5947770-5964375 Glycine max
Glyma.12G077300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5947770-5957769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305634 5265 Fabidae View MSA
124064559 5270 Rosid View MSA
123751264 5271 Pentapetalae View MSA
122792512 5272 Eudicot View MSA
122046739 5273 Angiosperm View MSA
121310650 5274 Embryophyte View MSA
123348080 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.96617 0.0 39.6507    
cufflinks 17.5249 0.0 83.0394    
cufflinks 28.1695 0.0 179.243 High High
cufflinks 7.81602 0.0 36.3996    
cufflinks 4.33281 0.0 21.1456   Low
cufflinks 8.07554 0.0 39.1271    
cufflinks 17.2589 0.0 79.934    
cufflinks 18.4132 0.0 103.284    
cufflinks 5.21979 0.0 27.5417   Low
cufflinks 0.496        
cufflinks 0.068       Low
cufflinks 0.994        
cufflinks 0.212        
cufflinks 0.119        
cufflinks 0.079       Low
cufflinks 0.923        
cufflinks 0.181        
cufflinks 1.124        
cufflinks 1.326       High
cufflinks 1.13       High
cufflinks 0.103       Low
cufflinks 1.085        
cufflinks 0.942        
cufflinks 0.081       Low
cufflinks 1.017        
cufflinks 0.103       Low

0 Strain