Gene : Glyma.12G073200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR12603:SF3 - RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN Genomic Order:  732
Name:  ? Glyma.12G073200 Secondary Identifier:  ? PAC:30548181
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G073200 0.5kb upstream 0.5kb upstream 8576 true Chr12: 5408066-5416641 Glycine max
Glyma.12G073200 0.5kb upstream 0.5kb upstream 500 false Chr12: 5408066-5408565 Glycine max
Glyma.12G073200 0.5kb downstream 0.5kb downstream 8576 true Chr12: 5408566-5417141 Glycine max
Glyma.12G073200 0.5kb downstream 0.5kb downstream 500 false Chr12: 5416642-5417141 Glycine max
Glyma.12G073200 1.0kb upstream 1.0kb upstream 9076 true Chr12: 5407566-5416641 Glycine max
Glyma.12G073200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5407566-5408565 Glycine max
Glyma.12G073200 1.0kb downstream 1.0kb downstream 9076 true Chr12: 5408566-5417641 Glycine max
Glyma.12G073200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5416642-5417641 Glycine max
Glyma.12G073200 2.0kb upstream 2.0kb upstream 10076 true Chr12: 5406566-5416641 Glycine max
Glyma.12G073200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5406566-5408565 Glycine max
Glyma.12G073200 2.0kb downstream 2.0kb downstream 10076 true Chr12: 5408566-5418641 Glycine max
Glyma.12G073200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5416642-5418641 Glycine max
Glyma.12G073200 5.0kb upstream 5.0kb upstream 13076 true Chr12: 5403566-5416641 Glycine max
Glyma.12G073200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5403566-5408565 Glycine max
Glyma.12G073200 5.0kb downstream 5.0kb downstream 13076 true Chr12: 5408566-5421641 Glycine max
Glyma.12G073200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5416642-5421641 Glycine max
Glyma.12G073200 10.0kb upstream 10.0kb upstream 18076 true Chr12: 5398566-5416641 Glycine max
Glyma.12G073200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5398566-5408565 Glycine max
Glyma.12G073200 10.0kb downstream 10.0kb downstream 18076 true Chr12: 5408566-5426641 Glycine max
Glyma.12G073200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5416642-5426641 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303044 5265 Fabidae View MSA
124065287 5270 Rosid View MSA
123744050 5271 Pentapetalae View MSA
122786724 5272 Eudicot View MSA
122047613 5273 Angiosperm View MSA
121310773 5274 Embryophyte View MSA
123425722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.4059 0.0 75.4997   High
cufflinks 10.1498 0.0 34.1866   Low
cufflinks 24.2526 0.0 94.847 High High
cufflinks 11.8173 0.0 40.0962    
cufflinks 12.064 0.0 40.6734    
cufflinks 16.7122 0.0 59.0591    
cufflinks 10.2902 0.0 34.645    
cufflinks 11.7887 0.0 39.9574    
cufflinks 13.1357 0.0 44.9395    
cufflinks 2.013       Low
cufflinks 6.087     High High
cufflinks 2.914        
cufflinks 2.213        
cufflinks 2.074       Low
cufflinks 8.699     High High
cufflinks 3.049        
cufflinks 2.8        
cufflinks 2.48        
cufflinks 2.261        
cufflinks 3.255        
cufflinks 5.816     High High
cufflinks 3.21        
cufflinks 2.437        
cufflinks 4.689        
cufflinks 3.299        
cufflinks 3.963        

0 Strain