Gene : Glyma.12G039200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11630:SF66 - DNA REPLICATION LICENSING FACTOR MCM4 Genomic Order:  392
Name:  ? Glyma.12G039200 Secondary Identifier:  ? PAC:30545777
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G039200 0.5kb upstream 0.5kb upstream 6468 true Chr12: 2835997-2842464 Glycine max
Glyma.12G039200 0.5kb upstream 0.5kb upstream 500 false Chr12: 2835997-2836496 Glycine max
Glyma.12G039200 0.5kb downstream 0.5kb downstream 6468 true Chr12: 2836497-2842964 Glycine max
Glyma.12G039200 0.5kb downstream 0.5kb downstream 500 false Chr12: 2842465-2842964 Glycine max
Glyma.12G039200 1.0kb upstream 1.0kb upstream 6968 true Chr12: 2835497-2842464 Glycine max
Glyma.12G039200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2835497-2836496 Glycine max
Glyma.12G039200 1.0kb downstream 1.0kb downstream 6968 true Chr12: 2836497-2843464 Glycine max
Glyma.12G039200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2842465-2843464 Glycine max
Glyma.12G039200 2.0kb upstream 2.0kb upstream 7968 true Chr12: 2834497-2842464 Glycine max
Glyma.12G039200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2834497-2836496 Glycine max
Glyma.12G039200 2.0kb downstream 2.0kb downstream 7968 true Chr12: 2836497-2844464 Glycine max
Glyma.12G039200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2842465-2844464 Glycine max
Glyma.12G039200 5.0kb upstream 5.0kb upstream 10968 true Chr12: 2831497-2842464 Glycine max
Glyma.12G039200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2831497-2836496 Glycine max
Glyma.12G039200 5.0kb downstream 5.0kb downstream 10968 true Chr12: 2836497-2847464 Glycine max
Glyma.12G039200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2842465-2847464 Glycine max
Glyma.12G039200 10.0kb upstream 10.0kb upstream 15968 true Chr12: 2826497-2842464 Glycine max
Glyma.12G039200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2826497-2836496 Glycine max
Glyma.12G039200 10.0kb downstream 10.0kb downstream 15968 true Chr12: 2836497-2852464 Glycine max
Glyma.12G039200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2842465-2852464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304247 5265 Fabidae View MSA
124061102 5270 Rosid View MSA
123748874 5271 Pentapetalae View MSA
122788296 5272 Eudicot View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.273951 0.0 1.01073   Low
cufflinks 7.22629 0.0 19.3636   High
cufflinks 0.675351 0.0 2.34174   Low
cufflinks 1.89761 0.0 5.75706    
cufflinks 3.29451 0.0 9.30236    
cufflinks 1.46475 0.0 4.60611    
cufflinks 1.70091 0.0 5.24239    
cufflinks 2.30498 0.0 6.8061    
cufflinks 3.46423 0.0 9.73757    
cufflinks 1.556        
cufflinks 0.179       Low
cufflinks 1.475        
cufflinks 3.286        
cufflinks 3.932       High
cufflinks 0.164       Low
cufflinks 1.652        
cufflinks 0.476        
cufflinks 1.145        
cufflinks 6.084       High
cufflinks 1.153        
cufflinks 0.193       Low
cufflinks 1.659        
cufflinks 4.831       High
cufflinks 0.108       Low
cufflinks 1.404        
cufflinks 0.555        

0 Strain