Gene : Glyma.12G050400 G. max Wm82.a2.v1
Genomic Order:  504 Name:  ? Glyma.12G050400
Secondary Identifier:  ? PAC:30547550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G050400 0.5kb upstream 0.5kb upstream 5430 true Chr12: 3612631-3618060 Glycine max
Glyma.12G050400 0.5kb upstream 0.5kb upstream 500 false Chr12: 3612631-3613130 Glycine max
Glyma.12G050400 0.5kb downstream 0.5kb downstream 5430 true Chr12: 3613131-3618560 Glycine max
Glyma.12G050400 0.5kb downstream 0.5kb downstream 500 false Chr12: 3618061-3618560 Glycine max
Glyma.12G050400 1.0kb upstream 1.0kb upstream 5930 true Chr12: 3612131-3618060 Glycine max
Glyma.12G050400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3612131-3613130 Glycine max
Glyma.12G050400 1.0kb downstream 1.0kb downstream 5930 true Chr12: 3613131-3619060 Glycine max
Glyma.12G050400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3618061-3619060 Glycine max
Glyma.12G050400 2.0kb upstream 2.0kb upstream 6930 true Chr12: 3611131-3618060 Glycine max
Glyma.12G050400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3611131-3613130 Glycine max
Glyma.12G050400 2.0kb downstream 2.0kb downstream 6930 true Chr12: 3613131-3620060 Glycine max
Glyma.12G050400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3618061-3620060 Glycine max
Glyma.12G050400 5.0kb upstream 5.0kb upstream 9930 true Chr12: 3608131-3618060 Glycine max
Glyma.12G050400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3608131-3613130 Glycine max
Glyma.12G050400 5.0kb downstream 5.0kb downstream 9930 true Chr12: 3613131-3623060 Glycine max
Glyma.12G050400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3618061-3623060 Glycine max
Glyma.12G050400 10.0kb upstream 10.0kb upstream 14930 true Chr12: 3603131-3618060 Glycine max
Glyma.12G050400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3603131-3613130 Glycine max
Glyma.12G050400 10.0kb downstream 10.0kb downstream 14930 true Chr12: 3613131-3628060 Glycine max
Glyma.12G050400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3618061-3628060 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617654 5273 Angiosperm View MSA
122253782 5265 Fabidae View MSA
123996234 5270 Rosid View MSA
123570746 5271 Pentapetalae View MSA
122605481 5272 Eudicot View MSA
123429125 5275 Viridiplantae View MSA
120889798 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.08037 0.0 9.92532    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.156        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.447        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain