Gene : Glyma.12G005000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF152 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL12 Genomic Order:  50
Name:  ? Glyma.12G005000 Secondary Identifier:  ? PAC:30547177
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G005000 0.5kb upstream 0.5kb upstream 6852 true Chr12: 388994-395845 Glycine max
Glyma.12G005000 0.5kb upstream 0.5kb upstream 500 false Chr12: 395346-395845 Glycine max
Glyma.12G005000 0.5kb downstream 0.5kb downstream 6852 true Chr12: 388494-395345 Glycine max
Glyma.12G005000 0.5kb downstream 0.5kb downstream 500 false Chr12: 388494-388993 Glycine max
Glyma.12G005000 1.0kb upstream 1.0kb upstream 7352 true Chr12: 388994-396345 Glycine max
Glyma.12G005000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 395346-396345 Glycine max
Glyma.12G005000 1.0kb downstream 1.0kb downstream 7352 true Chr12: 387994-395345 Glycine max
Glyma.12G005000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 387994-388993 Glycine max
Glyma.12G005000 2.0kb upstream 2.0kb upstream 8352 true Chr12: 388994-397345 Glycine max
Glyma.12G005000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 395346-397345 Glycine max
Glyma.12G005000 2.0kb downstream 2.0kb downstream 8352 true Chr12: 386994-395345 Glycine max
Glyma.12G005000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 386994-388993 Glycine max
Glyma.12G005000 5.0kb upstream 5.0kb upstream 11352 true Chr12: 388994-400345 Glycine max
Glyma.12G005000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 395346-400345 Glycine max
Glyma.12G005000 5.0kb downstream 5.0kb downstream 11352 true Chr12: 383994-395345 Glycine max
Glyma.12G005000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 383994-388993 Glycine max
Glyma.12G005000 10.0kb upstream 10.0kb upstream 16352 true Chr12: 388994-405345 Glycine max
Glyma.12G005000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 395346-405345 Glycine max
Glyma.12G005000 10.0kb downstream 10.0kb downstream 16352 true Chr12: 378994-395345 Glycine max
Glyma.12G005000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 378994-388993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026526 5273 Angiosperm View MSA
122305459 5265 Fabidae View MSA
124065817 5270 Rosid View MSA
123738815 5271 Pentapetalae View MSA
122789214 5272 Eudicot View MSA
121296369 5274 Embryophyte View MSA
123334545 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0167975 0.0 0.075967 Low Low
cufflinks 0.0160509 0.0 0.0727914 Low Low
cufflinks 2.08755 0.0 7.05823    
cufflinks 0.0354391 0.0 0.150041 Low  
cufflinks 1.85228 0.0 6.37931    
cufflinks 1.24201 0.0 4.42163    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.973375 0.0 3.51921    
cufflinks 4.75952 0.0 14.4461   High
cufflinks 0.092     Low  
cufflinks 0.66        
cufflinks 0.364        
cufflinks 0.978        
cufflinks 0.301        
cufflinks 0.174        
cufflinks 0.003     Low Low
cufflinks 2.605       High
cufflinks 0.014     Low  
cufflinks 0.004     Low Low
cufflinks 0.003     Low Low
cufflinks 1.249        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.653        
cufflinks 0.005     Low Low
cufflinks 2.184       High

0 Strain