Gene : Glyma.12G021500 G. max Wm82.a2.v1
Defline:  (1 of 6) PF03435 - Saccharopine dehydrogenase NADP binding domain (Sacchrp_dh_NADP) Genomic Order:  215
Name:  ? Glyma.12G021500 Secondary Identifier:  ? PAC:30548598
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G021500 0.5kb upstream 0.5kb upstream 5238 true Chr12: 1547281-1552518 Glycine max
Glyma.12G021500 0.5kb upstream 0.5kb upstream 500 false Chr12: 1552019-1552518 Glycine max
Glyma.12G021500 0.5kb downstream 0.5kb downstream 5238 true Chr12: 1546781-1552018 Glycine max
Glyma.12G021500 0.5kb downstream 0.5kb downstream 500 false Chr12: 1546781-1547280 Glycine max
Glyma.12G021500 1.0kb upstream 1.0kb upstream 5738 true Chr12: 1547281-1553018 Glycine max
Glyma.12G021500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1552019-1553018 Glycine max
Glyma.12G021500 1.0kb downstream 1.0kb downstream 5738 true Chr12: 1546281-1552018 Glycine max
Glyma.12G021500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1546281-1547280 Glycine max
Glyma.12G021500 2.0kb upstream 2.0kb upstream 6738 true Chr12: 1547281-1554018 Glycine max
Glyma.12G021500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1552019-1554018 Glycine max
Glyma.12G021500 2.0kb downstream 2.0kb downstream 6738 true Chr12: 1545281-1552018 Glycine max
Glyma.12G021500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1545281-1547280 Glycine max
Glyma.12G021500 5.0kb upstream 5.0kb upstream 9738 true Chr12: 1547281-1557018 Glycine max
Glyma.12G021500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1552019-1557018 Glycine max
Glyma.12G021500 5.0kb downstream 5.0kb downstream 9738 true Chr12: 1542281-1552018 Glycine max
Glyma.12G021500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1542281-1547280 Glycine max
Glyma.12G021500 10.0kb upstream 10.0kb upstream 14738 true Chr12: 1547281-1562018 Glycine max
Glyma.12G021500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1552019-1562018 Glycine max
Glyma.12G021500 10.0kb downstream 10.0kb downstream 14738 true Chr12: 1537281-1552018 Glycine max
Glyma.12G021500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1537281-1547280 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303853 5265 Fabidae View MSA
124065945 5270 Rosid View MSA
123752948 5271 Pentapetalae View MSA
122790267 5272 Eudicot View MSA
122051589 5273 Angiosperm View MSA
121345153 5274 Embryophyte View MSA
123426869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7121 0.0 39.3336   High
cufflinks 5.22678 0.0 15.0777    
cufflinks 3.03301 0.0 9.41579    
cufflinks 3.56499 0.0 10.8061    
cufflinks 1.8387 0.0 6.10152    
cufflinks 0.960481 0.0 3.40689   Low
cufflinks 2.74546 0.0 8.63386    
cufflinks 3.07101 0.0 9.51264    
cufflinks 0.664662 0.0 2.41784   Low
cufflinks 0.86        
cufflinks 0.101        
cufflinks 1.113        
cufflinks 0.141        
cufflinks 0.095        
cufflinks 0.09        
cufflinks 4.024       High
cufflinks 0.038     Low Low
cufflinks 1.265        
cufflinks 1.734        
cufflinks 3.717       High
cufflinks 0.084        
cufflinks 4.192       High
cufflinks 4.764       High
cufflinks 0.061       Low
cufflinks 3.762       High
cufflinks 0.057     Low Low

0 Strain