Gene : Glyma.12G019200 G. max Wm82.a2.v1
Defline:  (1 of 30) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  192
Name:  ? Glyma.12G019200 Secondary Identifier:  ? PAC:30546838
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G019200 0.5kb upstream 0.5kb upstream 3581 true Chr12: 1348453-1352033 Glycine max
Glyma.12G019200 0.5kb upstream 0.5kb upstream 500 false Chr12: 1351534-1352033 Glycine max
Glyma.12G019200 0.5kb downstream 0.5kb downstream 3581 true Chr12: 1347953-1351533 Glycine max
Glyma.12G019200 0.5kb downstream 0.5kb downstream 500 false Chr12: 1347953-1348452 Glycine max
Glyma.12G019200 1.0kb upstream 1.0kb upstream 4081 true Chr12: 1348453-1352533 Glycine max
Glyma.12G019200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 1351534-1352533 Glycine max
Glyma.12G019200 1.0kb downstream 1.0kb downstream 4081 true Chr12: 1347453-1351533 Glycine max
Glyma.12G019200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 1347453-1348452 Glycine max
Glyma.12G019200 2.0kb upstream 2.0kb upstream 5081 true Chr12: 1348453-1353533 Glycine max
Glyma.12G019200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 1351534-1353533 Glycine max
Glyma.12G019200 2.0kb downstream 2.0kb downstream 5081 true Chr12: 1346453-1351533 Glycine max
Glyma.12G019200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 1346453-1348452 Glycine max
Glyma.12G019200 5.0kb upstream 5.0kb upstream 8081 true Chr12: 1348453-1356533 Glycine max
Glyma.12G019200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 1351534-1356533 Glycine max
Glyma.12G019200 5.0kb downstream 5.0kb downstream 8081 true Chr12: 1343453-1351533 Glycine max
Glyma.12G019200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 1343453-1348452 Glycine max
Glyma.12G019200 10.0kb upstream 10.0kb upstream 13081 true Chr12: 1348453-1361533 Glycine max
Glyma.12G019200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 1351534-1361533 Glycine max
Glyma.12G019200 10.0kb downstream 10.0kb downstream 13081 true Chr12: 1338453-1351533 Glycine max
Glyma.12G019200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 1338453-1348452 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303282 5265 Fabidae View MSA
124060741 5270 Rosid View MSA
123749629 5271 Pentapetalae View MSA
122788244 5272 Eudicot View MSA
122047103 5273 Angiosperm View MSA
121351635 5274 Embryophyte View MSA
123382255 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.45916 0.0 22.1166    
cufflinks 13.8638 0.0 38.321   High
cufflinks 14.4335 0.0 39.7168   High
cufflinks 7.19808 0.0 21.3885    
cufflinks 6.53227 0.0 19.6873    
cufflinks 2.80635 0.0 9.48968   Low
cufflinks 4.8713 0.0 15.3191    
cufflinks 12.1966 0.0 34.0592    
cufflinks 7.06162 0.0 21.0436    
cufflinks 1.587        
cufflinks 0.168       Low
cufflinks 3.955       High
cufflinks 0.723        
cufflinks 0.742        
cufflinks 0.142       Low
cufflinks 0.935        
cufflinks 2.154        
cufflinks 3.423       High
cufflinks 3.72       High
cufflinks 0.926        
cufflinks 0.177       Low
cufflinks 1.095        
cufflinks 1.521        
cufflinks 0.168       Low
cufflinks 0.996        
cufflinks 0.438        

0 Strain