Gene : Glyma.11G244900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31683:SF26 - PECTATE LYASE 5-RELATED Genomic Order:  2449
Name:  ? Glyma.11G244900 Secondary Identifier:  ? PAC:30531235
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G244900 0.5kb upstream 0.5kb upstream 3023 true Chr11: 33856985-33860007 Glycine max
Glyma.11G244900 0.5kb upstream 0.5kb upstream 500 false Chr11: 33859508-33860007 Glycine max
Glyma.11G244900 0.5kb downstream 0.5kb downstream 3023 true Chr11: 33856485-33859507 Glycine max
Glyma.11G244900 0.5kb downstream 0.5kb downstream 500 false Chr11: 33856485-33856984 Glycine max
Glyma.11G244900 1.0kb upstream 1.0kb upstream 3523 true Chr11: 33856985-33860507 Glycine max
Glyma.11G244900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33859508-33860507 Glycine max
Glyma.11G244900 1.0kb downstream 1.0kb downstream 3523 true Chr11: 33855985-33859507 Glycine max
Glyma.11G244900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33855985-33856984 Glycine max
Glyma.11G244900 2.0kb upstream 2.0kb upstream 4523 true Chr11: 33856985-33861507 Glycine max
Glyma.11G244900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33859508-33861507 Glycine max
Glyma.11G244900 2.0kb downstream 2.0kb downstream 4523 true Chr11: 33854985-33859507 Glycine max
Glyma.11G244900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33854985-33856984 Glycine max
Glyma.11G244900 5.0kb upstream 5.0kb upstream 7523 true Chr11: 33856985-33864507 Glycine max
Glyma.11G244900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33859508-33864507 Glycine max
Glyma.11G244900 5.0kb downstream 5.0kb downstream 7523 true Chr11: 33851985-33859507 Glycine max
Glyma.11G244900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33851985-33856984 Glycine max
Glyma.11G244900 10.0kb upstream 10.0kb upstream 12523 true Chr11: 33856985-33869507 Glycine max
Glyma.11G244900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33859508-33869507 Glycine max
Glyma.11G244900 10.0kb downstream 10.0kb downstream 12523 true Chr11: 33846985-33859507 Glycine max
Glyma.11G244900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33846985-33856984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300237 5265 Fabidae View MSA
124071209 5270 Rosid View MSA
123749101 5271 Pentapetalae View MSA
122788892 5272 Eudicot View MSA
122047336 5273 Angiosperm View MSA
121348568 5274 Embryophyte View MSA
123380918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.396729 0.0 1.95298   Low
cufflinks 4.86554 0.0 20.4162    
cufflinks 2.28888 0.0 7.88891    
cufflinks 15.4243 0.0 54.9908    
cufflinks 32.4289 0.0 116.42 High High
cufflinks 25.4378 0.0 88.618 High  
cufflinks 1.72652 0.0 8.49591    
cufflinks 18.3735 0.0 63.921    
cufflinks 12.5578 0.0 43.882    
cufflinks 9.099     High  
cufflinks 0.483       Low
cufflinks 0.537       Low
cufflinks 14.254     High High
cufflinks 27.653     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.703     High  
cufflinks 1.071        
cufflinks 3.096        
cufflinks 0.88       Low
cufflinks 5.845        
cufflinks 1.952        
cufflinks 7.444     High  
cufflinks 4.299        
cufflinks 0.698       Low
cufflinks 6.139        
cufflinks 2.845        

0 Strain