Gene : Glyma.11G243400 G. max Wm82.a2.v1
Defline:  (1 of 261) PTHR14155 - RING FINGER DOMAIN-CONTAINING Genomic Order:  2434
Name:  ? Glyma.11G243400 Secondary Identifier:  ? PAC:30529830
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G243400 0.5kb upstream 0.5kb upstream 1346 true Chr11: 33726766-33728111 Glycine max
Glyma.11G243400 0.5kb upstream 0.5kb upstream 500 false Chr11: 33727612-33728111 Glycine max
Glyma.11G243400 0.5kb downstream 0.5kb downstream 1346 true Chr11: 33726266-33727611 Glycine max
Glyma.11G243400 0.5kb downstream 0.5kb downstream 500 false Chr11: 33726266-33726765 Glycine max
Glyma.11G243400 1.0kb upstream 1.0kb upstream 1846 true Chr11: 33726766-33728611 Glycine max
Glyma.11G243400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 33727612-33728611 Glycine max
Glyma.11G243400 1.0kb downstream 1.0kb downstream 1846 true Chr11: 33725766-33727611 Glycine max
Glyma.11G243400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 33725766-33726765 Glycine max
Glyma.11G243400 2.0kb upstream 2.0kb upstream 2846 true Chr11: 33726766-33729611 Glycine max
Glyma.11G243400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 33727612-33729611 Glycine max
Glyma.11G243400 2.0kb downstream 2.0kb downstream 2846 true Chr11: 33724766-33727611 Glycine max
Glyma.11G243400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 33724766-33726765 Glycine max
Glyma.11G243400 5.0kb upstream 5.0kb upstream 5846 true Chr11: 33726766-33732611 Glycine max
Glyma.11G243400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 33727612-33732611 Glycine max
Glyma.11G243400 5.0kb downstream 5.0kb downstream 5846 true Chr11: 33721766-33727611 Glycine max
Glyma.11G243400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 33721766-33726765 Glycine max
Glyma.11G243400 10.0kb upstream 10.0kb upstream 10846 true Chr11: 33726766-33737611 Glycine max
Glyma.11G243400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 33727612-33737611 Glycine max
Glyma.11G243400 10.0kb downstream 10.0kb downstream 10846 true Chr11: 33716766-33727611 Glycine max
Glyma.11G243400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 33716766-33726765 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304352 5265 Fabidae View MSA
124062810 5270 Rosid View MSA
123750154 5271 Pentapetalae View MSA
122792700 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.1987 0.0 86.9269 High High
cufflinks 0.547172 0.0 2.11304    
cufflinks 6.5106 0.0 20.9294    
cufflinks 0.152805 0.0 0.619992 Low Low
cufflinks 2.96594 0.0 10.4709    
cufflinks 2.25982 0.0 8.13729    
cufflinks 0.469 0.0 1.82417    
cufflinks 0.553149 0.0 2.13407    
cufflinks 1.50012 0.0 5.52806    
cufflinks 2.449        
cufflinks 16.37     High  
cufflinks 14.915     High  
cufflinks 7.95     High  
cufflinks 1.487       Low
cufflinks 42.425     High High
cufflinks 6.178        
cufflinks 12.808     High  
cufflinks 9.124     High  
cufflinks 0.486       Low
cufflinks 2.159        
cufflinks 12.765     High  
cufflinks 4.383        
cufflinks 4.384        
cufflinks 7.246     High  
cufflinks 2.662        
cufflinks 14.511     High  

0 Strain