Gene : Glyma.11G222100 G. max Wm82.a2.v1
Defline:  (1 of 6) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  2221
Name:  ? Glyma.11G222100 Secondary Identifier:  ? PAC:30530654
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G222100 0.5kb upstream 0.5kb upstream 7326 true Chr11: 31731779-31739104 Glycine max
Glyma.11G222100 0.5kb upstream 0.5kb upstream 500 false Chr11: 31738605-31739104 Glycine max
Glyma.11G222100 0.5kb downstream 0.5kb downstream 7326 true Chr11: 31731279-31738604 Glycine max
Glyma.11G222100 0.5kb downstream 0.5kb downstream 500 false Chr11: 31731279-31731778 Glycine max
Glyma.11G222100 1.0kb upstream 1.0kb upstream 7826 true Chr11: 31731779-31739604 Glycine max
Glyma.11G222100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 31738605-31739604 Glycine max
Glyma.11G222100 1.0kb downstream 1.0kb downstream 7826 true Chr11: 31730779-31738604 Glycine max
Glyma.11G222100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 31730779-31731778 Glycine max
Glyma.11G222100 2.0kb upstream 2.0kb upstream 8826 true Chr11: 31731779-31740604 Glycine max
Glyma.11G222100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 31738605-31740604 Glycine max
Glyma.11G222100 2.0kb downstream 2.0kb downstream 8826 true Chr11: 31729779-31738604 Glycine max
Glyma.11G222100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 31729779-31731778 Glycine max
Glyma.11G222100 5.0kb upstream 5.0kb upstream 11826 true Chr11: 31731779-31743604 Glycine max
Glyma.11G222100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 31738605-31743604 Glycine max
Glyma.11G222100 5.0kb downstream 5.0kb downstream 11826 true Chr11: 31726779-31738604 Glycine max
Glyma.11G222100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 31726779-31731778 Glycine max
Glyma.11G222100 10.0kb upstream 10.0kb upstream 16826 true Chr11: 31731779-31748604 Glycine max
Glyma.11G222100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 31738605-31748604 Glycine max
Glyma.11G222100 10.0kb downstream 10.0kb downstream 16826 true Chr11: 31721779-31738604 Glycine max
Glyma.11G222100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 31721779-31731778 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305033 5265 Fabidae View MSA
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4366 0.0 56.0845   High
cufflinks 13.2359 0.0 52.3818   High
cufflinks 4.35817 0.0 21.1132    
cufflinks 6.12255 0.0 28.8786    
cufflinks 4.03379 0.0 22.4214    
cufflinks 2.76348 0.0 12.8758    
cufflinks 2.11248 0.0 12.6969   Low
cufflinks 2.92041 0.0 16.2065    
cufflinks 7.46787 0.0 34.8789    
cufflinks 0.357        
cufflinks 0.064       Low
cufflinks 0.367        
cufflinks 0.125        
cufflinks 0.267        
cufflinks 0.311        
cufflinks 2.017       High
cufflinks 0.036     Low Low
cufflinks 0.504        
cufflinks 0.625        
cufflinks 2.336       High
cufflinks 0.05     Low Low
cufflinks 2.059       High
cufflinks 1.508       High
cufflinks 0.058     Low Low
cufflinks 2.273       High
cufflinks 0.086        

0 Strain