Gene : Glyma.11G175200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  1752
Name:  ? Glyma.11G175200 Secondary Identifier:  ? PAC:30529957
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G175200 0.5kb upstream 0.5kb upstream 6702 true Chr11: 19228703-19235404 Glycine max
Glyma.11G175200 0.5kb upstream 0.5kb upstream 500 false Chr11: 19228703-19229202 Glycine max
Glyma.11G175200 0.5kb downstream 0.5kb downstream 6702 true Chr11: 19229203-19235904 Glycine max
Glyma.11G175200 0.5kb downstream 0.5kb downstream 500 false Chr11: 19235405-19235904 Glycine max
Glyma.11G175200 1.0kb upstream 1.0kb upstream 7202 true Chr11: 19228203-19235404 Glycine max
Glyma.11G175200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 19228203-19229202 Glycine max
Glyma.11G175200 1.0kb downstream 1.0kb downstream 7202 true Chr11: 19229203-19236404 Glycine max
Glyma.11G175200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 19235405-19236404 Glycine max
Glyma.11G175200 2.0kb upstream 2.0kb upstream 8202 true Chr11: 19227203-19235404 Glycine max
Glyma.11G175200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 19227203-19229202 Glycine max
Glyma.11G175200 2.0kb downstream 2.0kb downstream 8202 true Chr11: 19229203-19237404 Glycine max
Glyma.11G175200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 19235405-19237404 Glycine max
Glyma.11G175200 5.0kb upstream 5.0kb upstream 11202 true Chr11: 19224203-19235404 Glycine max
Glyma.11G175200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 19224203-19229202 Glycine max
Glyma.11G175200 5.0kb downstream 5.0kb downstream 11202 true Chr11: 19229203-19240404 Glycine max
Glyma.11G175200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 19235405-19240404 Glycine max
Glyma.11G175200 10.0kb upstream 10.0kb upstream 16202 true Chr11: 19219203-19235404 Glycine max
Glyma.11G175200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 19219203-19229202 Glycine max
Glyma.11G175200 10.0kb downstream 10.0kb downstream 16202 true Chr11: 19229203-19245404 Glycine max
Glyma.11G175200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 19235405-19245404 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307029 5265 Fabidae View MSA
124063995 5270 Rosid View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.1748 0.0 187.638 High Low
cufflinks 118.843 0.0 430.753 High  
cufflinks 76.287 0.0 248.934 High Low
cufflinks 133.31 0.0 502.892 High  
cufflinks 124.159 0.0 454.889 High  
cufflinks 174.531 0.0 565.371 High High
cufflinks 199.23 0.0 670.004 High High
cufflinks 103.333 0.0 361.514 High  
cufflinks 133.458 0.0 501.677 High  
cufflinks 18.716     High  
cufflinks 9.741     High  
cufflinks 17.48     High  
cufflinks 22.588     High High
cufflinks 25.374     High High
cufflinks 6.841     High Low
cufflinks 12.604     High  
cufflinks 8.167     High Low
cufflinks 25.872     High High
cufflinks 18.719     High  
cufflinks 12.816     High  
cufflinks 9.609     High  
cufflinks 12.189     High  
cufflinks 13.669     High  
cufflinks 11.31     High  
cufflinks 12.42     High  
cufflinks 12.149     High  

0 Strain