Gene : Glyma.11G145200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33604:SF2 - GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 Genomic Order:  1452
Name:  ? Glyma.11G145200 Secondary Identifier:  ? PAC:30530434
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G145200 0.5kb upstream 0.5kb upstream 5715 true Chr11: 11157723-11163437 Glycine max
Glyma.11G145200 0.5kb upstream 0.5kb upstream 500 false Chr11: 11157723-11158222 Glycine max
Glyma.11G145200 0.5kb downstream 0.5kb downstream 5715 true Chr11: 11158223-11163937 Glycine max
Glyma.11G145200 0.5kb downstream 0.5kb downstream 500 false Chr11: 11163438-11163937 Glycine max
Glyma.11G145200 1.0kb upstream 1.0kb upstream 6215 true Chr11: 11157223-11163437 Glycine max
Glyma.11G145200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11157223-11158222 Glycine max
Glyma.11G145200 1.0kb downstream 1.0kb downstream 6215 true Chr11: 11158223-11164437 Glycine max
Glyma.11G145200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11163438-11164437 Glycine max
Glyma.11G145200 2.0kb upstream 2.0kb upstream 7215 true Chr11: 11156223-11163437 Glycine max
Glyma.11G145200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11156223-11158222 Glycine max
Glyma.11G145200 2.0kb downstream 2.0kb downstream 7215 true Chr11: 11158223-11165437 Glycine max
Glyma.11G145200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11163438-11165437 Glycine max
Glyma.11G145200 5.0kb upstream 5.0kb upstream 10215 true Chr11: 11153223-11163437 Glycine max
Glyma.11G145200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11153223-11158222 Glycine max
Glyma.11G145200 5.0kb downstream 5.0kb downstream 10215 true Chr11: 11158223-11168437 Glycine max
Glyma.11G145200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11163438-11168437 Glycine max
Glyma.11G145200 10.0kb upstream 10.0kb upstream 15215 true Chr11: 11148223-11163437 Glycine max
Glyma.11G145200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11148223-11158222 Glycine max
Glyma.11G145200 10.0kb downstream 10.0kb downstream 15215 true Chr11: 11158223-11173437 Glycine max
Glyma.11G145200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11163438-11173437 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305292 5265 Fabidae View MSA
124061550 5270 Rosid View MSA
123753195 5271 Pentapetalae View MSA
122791736 5272 Eudicot View MSA
122041734 5273 Angiosperm View MSA
121351549 5274 Embryophyte View MSA
123382221 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.374315 0.0 2.25918    
cufflinks 0.00618566 0.0 0.0350336 Low Low
cufflinks 1.8019 0.0 7.16226    
cufflinks 1.03154 0.0 3.7477    
cufflinks 7.24573 0.0 25.0959   High
cufflinks 7.13004 0.0 24.7229   High
cufflinks 0.855905 0.0 3.20584    
cufflinks 0.0230733 0.0 0.0946003 Low Low
cufflinks 2.23437 0.0 8.25189    
cufflinks 0.041     Low  
cufflinks 2.98       High
cufflinks 0.054     Low  
cufflinks 1.874       High
cufflinks 4.446       High
cufflinks 0.043     Low  
cufflinks 0.025     Low  
cufflinks 1.144        
cufflinks 0.032     Low  
cufflinks 0.004     Low Low
cufflinks 0.019     Low  
cufflinks 1.449        
cufflinks 0.019     Low  
cufflinks 0.018     Low  
cufflinks 2.714       High
cufflinks 0.01     Low Low
cufflinks 2.07       High

0 Strain