Gene : Glyma.11G160800 G. max Wm82.a2.v1
Defline:  (1 of 5) PF00077//PF00098 - Retroviral aspartyl protease (RVP) // Zinc knuckle (zf-CCHC) Genomic Order:  1608
Name:  ? Glyma.11G160800 Secondary Identifier:  ? PAC:30529359
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G160800 0.5kb upstream 0.5kb upstream 3360 true Chr11: 14788533-14791892 Glycine max
Glyma.11G160800 0.5kb upstream 0.5kb upstream 500 false Chr11: 14791393-14791892 Glycine max
Glyma.11G160800 0.5kb downstream 0.5kb downstream 3360 true Chr11: 14788033-14791392 Glycine max
Glyma.11G160800 0.5kb downstream 0.5kb downstream 500 false Chr11: 14788033-14788532 Glycine max
Glyma.11G160800 1.0kb upstream 1.0kb upstream 3860 true Chr11: 14788533-14792392 Glycine max
Glyma.11G160800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 14791393-14792392 Glycine max
Glyma.11G160800 1.0kb downstream 1.0kb downstream 3860 true Chr11: 14787533-14791392 Glycine max
Glyma.11G160800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 14787533-14788532 Glycine max
Glyma.11G160800 2.0kb upstream 2.0kb upstream 4860 true Chr11: 14788533-14793392 Glycine max
Glyma.11G160800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 14791393-14793392 Glycine max
Glyma.11G160800 2.0kb downstream 2.0kb downstream 4860 true Chr11: 14786533-14791392 Glycine max
Glyma.11G160800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 14786533-14788532 Glycine max
Glyma.11G160800 5.0kb upstream 5.0kb upstream 7860 true Chr11: 14788533-14796392 Glycine max
Glyma.11G160800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 14791393-14796392 Glycine max
Glyma.11G160800 5.0kb downstream 5.0kb downstream 7860 true Chr11: 14783533-14791392 Glycine max
Glyma.11G160800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 14783533-14788532 Glycine max
Glyma.11G160800 10.0kb upstream 10.0kb upstream 12860 true Chr11: 14788533-14801392 Glycine max
Glyma.11G160800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 14791393-14801392 Glycine max
Glyma.11G160800 10.0kb downstream 10.0kb downstream 12860 true Chr11: 14778533-14791392 Glycine max
Glyma.11G160800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 14778533-14788532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122250435 5265 Fabidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0674796 0.0 0.458907 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00212424 0.0 0.0181764 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain