Gene : Glyma.11G166100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10953//PTHR10953:SF164 - UBIQUITIN-ACTIVATING ENZYME E1 Genomic Order:  1661
Name:  ? Glyma.11G166100 Secondary Identifier:  ? PAC:30529884
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G166100 0.5kb upstream 0.5kb upstream 7888 true Chr11: 15941045-15948932 Glycine max
Glyma.11G166100 0.5kb upstream 0.5kb upstream 500 false Chr11: 15941045-15941544 Glycine max
Glyma.11G166100 0.5kb downstream 0.5kb downstream 7888 true Chr11: 15941545-15949432 Glycine max
Glyma.11G166100 0.5kb downstream 0.5kb downstream 500 false Chr11: 15948933-15949432 Glycine max
Glyma.11G166100 1.0kb upstream 1.0kb upstream 8388 true Chr11: 15940545-15948932 Glycine max
Glyma.11G166100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 15940545-15941544 Glycine max
Glyma.11G166100 1.0kb downstream 1.0kb downstream 8388 true Chr11: 15941545-15949932 Glycine max
Glyma.11G166100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 15948933-15949932 Glycine max
Glyma.11G166100 2.0kb upstream 2.0kb upstream 9388 true Chr11: 15939545-15948932 Glycine max
Glyma.11G166100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 15939545-15941544 Glycine max
Glyma.11G166100 2.0kb downstream 2.0kb downstream 9388 true Chr11: 15941545-15950932 Glycine max
Glyma.11G166100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 15948933-15950932 Glycine max
Glyma.11G166100 5.0kb upstream 5.0kb upstream 12388 true Chr11: 15936545-15948932 Glycine max
Glyma.11G166100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 15936545-15941544 Glycine max
Glyma.11G166100 5.0kb downstream 5.0kb downstream 12388 true Chr11: 15941545-15953932 Glycine max
Glyma.11G166100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 15948933-15953932 Glycine max
Glyma.11G166100 10.0kb upstream 10.0kb upstream 17388 true Chr11: 15931545-15948932 Glycine max
Glyma.11G166100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 15931545-15941544 Glycine max
Glyma.11G166100 10.0kb downstream 10.0kb downstream 17388 true Chr11: 15941545-15958932 Glycine max
Glyma.11G166100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 15948933-15958932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312785 5265 Fabidae View MSA
124072689 5270 Rosid View MSA
123745856 5271 Pentapetalae View MSA
122789402 5272 Eudicot View MSA
122047936 5273 Angiosperm View MSA
121345745 5274 Embryophyte View MSA
123427546 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1032 0.0 59.6674   Low
cufflinks 26.3262 0.0 76.5675 High  
cufflinks 27.3933 0.0 80.2576 High  
cufflinks 29.0951 0.0 85.8866 High  
cufflinks 32.4169 0.0 97.1763 High High
cufflinks 29.7279 0.0 88.0568 High  
cufflinks 28.6388 0.0 84.1403 High  
cufflinks 23.8943 0.0 68.7303 High Low
cufflinks 27.5787 0.0 80.7839 High  
cufflinks 14.055     High  
cufflinks 11.124     High  
cufflinks 16.582     High  
cufflinks 21.53     High High
cufflinks 24.323     High High
cufflinks 9.605     High  
cufflinks 10.636     High  
cufflinks 9.571     High  
cufflinks 15.117     High  
cufflinks 19.169     High High
cufflinks 9.069     High Low
cufflinks 11.039     High  
cufflinks 10.312     High  
cufflinks 10.464     High  
cufflinks 13.383     High  
cufflinks 9.428     High  
cufflinks 12.426     High  

0 Strain