Gene : Glyma.11G110900 G. max Wm82.a2.v1
Defline:  (1 of 44) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  1109
Name:  ? Glyma.11G110900 Secondary Identifier:  ? PAC:30529091
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G110900 0.5kb upstream 0.5kb upstream 3931 true Chr11: 8474507-8478437 Glycine max
Glyma.11G110900 0.5kb upstream 0.5kb upstream 500 false Chr11: 8474507-8475006 Glycine max
Glyma.11G110900 0.5kb downstream 0.5kb downstream 3931 true Chr11: 8475007-8478937 Glycine max
Glyma.11G110900 0.5kb downstream 0.5kb downstream 500 false Chr11: 8478438-8478937 Glycine max
Glyma.11G110900 1.0kb upstream 1.0kb upstream 4431 true Chr11: 8474007-8478437 Glycine max
Glyma.11G110900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8474007-8475006 Glycine max
Glyma.11G110900 1.0kb downstream 1.0kb downstream 4431 true Chr11: 8475007-8479437 Glycine max
Glyma.11G110900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8478438-8479437 Glycine max
Glyma.11G110900 2.0kb upstream 2.0kb upstream 5431 true Chr11: 8473007-8478437 Glycine max
Glyma.11G110900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8473007-8475006 Glycine max
Glyma.11G110900 2.0kb downstream 2.0kb downstream 5431 true Chr11: 8475007-8480437 Glycine max
Glyma.11G110900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8478438-8480437 Glycine max
Glyma.11G110900 5.0kb upstream 5.0kb upstream 8431 true Chr11: 8470007-8478437 Glycine max
Glyma.11G110900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8470007-8475006 Glycine max
Glyma.11G110900 5.0kb downstream 5.0kb downstream 8431 true Chr11: 8475007-8483437 Glycine max
Glyma.11G110900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8478438-8483437 Glycine max
Glyma.11G110900 10.0kb upstream 10.0kb upstream 13431 true Chr11: 8465007-8478437 Glycine max
Glyma.11G110900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8465007-8475006 Glycine max
Glyma.11G110900 10.0kb downstream 10.0kb downstream 13431 true Chr11: 8475007-8488437 Glycine max
Glyma.11G110900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8478438-8488437 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308918 5265 Fabidae View MSA
124070942 5270 Rosid View MSA
123749829 5271 Pentapetalae View MSA
122795221 5272 Eudicot View MSA
122046752 5273 Angiosperm View MSA
121348007 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.00526 0.0 34.3055   High
cufflinks 5.32948 0.0 16.9883    
cufflinks 3.34427 0.0 15.8589    
cufflinks 6.58171 0.0 24.7826    
cufflinks 1.93827 0.0 8.36017   Low
cufflinks 3.25916 0.0 12.1232    
cufflinks 5.29162 0.0 21.7076    
cufflinks 6.86368 0.0 32.2979    
cufflinks 3.68279 0.0 13.0689    
cufflinks 0.438        
cufflinks 0.254        
cufflinks 0.534        
cufflinks 0.304        
cufflinks 0.293        
cufflinks 0.21       Low
cufflinks 1.67       High
cufflinks 0.183       Low
cufflinks 0.811        
cufflinks 0.753        
cufflinks 1.18       High
cufflinks 0.242        
cufflinks 1.523       High
cufflinks 1.365       High
cufflinks 0.293        
cufflinks 1.546       High
cufflinks 0.13       Low

0 Strain