Gene : Glyma.11G121500 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1215
Name:  ? Glyma.11G121500 Secondary Identifier:  ? PAC:30530608
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G121500 0.5kb upstream 0.5kb upstream 2546 true Chr11: 9289768-9292313 Glycine max
Glyma.11G121500 0.5kb upstream 0.5kb upstream 500 false Chr11: 9291814-9292313 Glycine max
Glyma.11G121500 0.5kb downstream 0.5kb downstream 2546 true Chr11: 9289268-9291813 Glycine max
Glyma.11G121500 0.5kb downstream 0.5kb downstream 500 false Chr11: 9289268-9289767 Glycine max
Glyma.11G121500 1.0kb upstream 1.0kb upstream 3046 true Chr11: 9289768-9292813 Glycine max
Glyma.11G121500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9291814-9292813 Glycine max
Glyma.11G121500 1.0kb downstream 1.0kb downstream 3046 true Chr11: 9288768-9291813 Glycine max
Glyma.11G121500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9288768-9289767 Glycine max
Glyma.11G121500 2.0kb upstream 2.0kb upstream 4046 true Chr11: 9289768-9293813 Glycine max
Glyma.11G121500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9291814-9293813 Glycine max
Glyma.11G121500 2.0kb downstream 2.0kb downstream 4046 true Chr11: 9287768-9291813 Glycine max
Glyma.11G121500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9287768-9289767 Glycine max
Glyma.11G121500 5.0kb upstream 5.0kb upstream 7046 true Chr11: 9289768-9296813 Glycine max
Glyma.11G121500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9291814-9296813 Glycine max
Glyma.11G121500 5.0kb downstream 5.0kb downstream 7046 true Chr11: 9284768-9291813 Glycine max
Glyma.11G121500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9284768-9289767 Glycine max
Glyma.11G121500 10.0kb upstream 10.0kb upstream 12046 true Chr11: 9289768-9301813 Glycine max
Glyma.11G121500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9291814-9301813 Glycine max
Glyma.11G121500 10.0kb downstream 10.0kb downstream 12046 true Chr11: 9279768-9291813 Glycine max
Glyma.11G121500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9279768-9289767 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303678 5265 Fabidae View MSA
124063386 5270 Rosid View MSA
123751448 5271 Pentapetalae View MSA
122786309 5272 Eudicot View MSA
122045873 5273 Angiosperm View MSA
121310522 5274 Embryophyte View MSA
123347983 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.164452 0.0 0.636062 Low  
cufflinks 0.104592 0.0 0.411484 Low  
cufflinks 0.143613 0.0 0.557211 Low  
cufflinks 0.122548 0.0 0.479241 Low  
cufflinks 0.150488 0.0 0.584532 Low  
cufflinks 0.0809409 0.0 0.321458 Low Low
cufflinks 0.155563 0.0 0.603456 Low  
cufflinks 0.128466 0.0 0.501605 Low  
cufflinks 0.249121 0.0 0.945628 Low High
cufflinks 0.059     Low Low
cufflinks 0.038     Low Low
cufflinks 0.197        
cufflinks 0.424       High
cufflinks 0.437       High
cufflinks 0.092        
cufflinks 0.154        
cufflinks 0.211        
cufflinks 0.28        
cufflinks 0.225        
cufflinks 0.166        
cufflinks 0.06     Low Low
cufflinks 0.12        
cufflinks 0.196        
cufflinks 0.064       Low
cufflinks 0.192        
cufflinks 0.108        

0 Strain